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Run summary data
Master run log log_20161128115554.txt
BIOM table statistics biom_table_summary.txt
Filtered BIOM table (minimum sequence count: 7748) table_mc7748.biom.gz
rarefied BIOM table (sampling depth: 7748) table_even7748.biom.gz
Taxonomic summary results
Taxa summary bar plots bar_charts.html
Taxa summary area plots area_charts.html
Alpha diversity results
Alpha rarefaction plots rarefaction_plots.html
Beta diversity results (even sampling: 7748)
PCoA plot (abund_jaccard) index.html
Distance matrix (abund_jaccard) abund_jaccard_dm.txt
Principal coordinate matrix (abund_jaccard) abund_jaccard_pc.txt
PCoA plot (binary_chisq) index.html
Distance matrix (binary_chisq) binary_chisq_dm.txt
Principal coordinate matrix (binary_chisq) binary_chisq_pc.txt
PCoA plot (binary_chord) index.html
Distance matrix (binary_chord) binary_chord_dm.txt
Principal coordinate matrix (binary_chord) binary_chord_pc.txt
PCoA plot (binary_euclidean) index.html
Distance matrix (binary_euclidean) binary_euclidean_dm.txt
Principal coordinate matrix (binary_euclidean) binary_euclidean_pc.txt
PCoA plot (binary_hamming) index.html
Distance matrix (binary_hamming) binary_hamming_dm.txt
Principal coordinate matrix (binary_hamming) binary_hamming_pc.txt
PCoA plot (binary_jaccard) index.html
Distance matrix (binary_jaccard) binary_jaccard_dm.txt
Principal coordinate matrix (binary_jaccard) binary_jaccard_pc.txt
PCoA plot (binary_lennon) index.html
Distance matrix (binary_lennon) binary_lennon_dm.txt
Principal coordinate matrix (binary_lennon) binary_lennon_pc.txt
PCoA plot (binary_ochiai) index.html
Distance matrix (binary_ochiai) binary_ochiai_dm.txt
Principal coordinate matrix (binary_ochiai) binary_ochiai_pc.txt
PCoA plot (binary_pearson) index.html
Distance matrix (binary_pearson) binary_pearson_dm.txt
Principal coordinate matrix (binary_pearson) binary_pearson_pc.txt
PCoA plot (binary_sorensen_dice) index.html
Distance matrix (binary_sorensen_dice) binary_sorensen_dice_dm.txt
Principal coordinate matrix (binary_sorensen_dice) binary_sorensen_dice_pc.txt
PCoA plot (bray_curtis) index.html
Distance matrix (bray_curtis) bray_curtis_dm.txt
Principal coordinate matrix (bray_curtis) bray_curtis_pc.txt
PCoA plot (bray_curtis_faith) index.html
Distance matrix (bray_curtis_faith) bray_curtis_faith_dm.txt
Principal coordinate matrix (bray_curtis_faith) bray_curtis_faith_pc.txt
PCoA plot (bray_curtis_magurran) index.html
Distance matrix (bray_curtis_magurran) bray_curtis_magurran_dm.txt
Principal coordinate matrix (bray_curtis_magurran) bray_curtis_magurran_pc.txt
PCoA plot (canberra) index.html
Distance matrix (canberra) canberra_dm.txt
Principal coordinate matrix (canberra) canberra_pc.txt
PCoA plot (chisq) index.html
Distance matrix (chisq) chisq_dm.txt
Principal coordinate matrix (chisq) chisq_pc.txt
PCoA plot (chord) index.html
Distance matrix (chord) chord_dm.txt
Principal coordinate matrix (chord) chord_pc.txt
PCoA plot (euclidean) index.html
Distance matrix (euclidean) euclidean_dm.txt
Principal coordinate matrix (euclidean) euclidean_pc.txt
PCoA plot (gower) index.html
Distance matrix (gower) gower_dm.txt
Principal coordinate matrix (gower) gower_pc.txt
PCoA plot (hellinger) index.html
Distance matrix (hellinger) hellinger_dm.txt
Principal coordinate matrix (hellinger) hellinger_pc.txt
PCoA plot (kulczynski) index.html
Distance matrix (kulczynski) kulczynski_dm.txt
Principal coordinate matrix (kulczynski) kulczynski_pc.txt
PCoA plot (manhattan) index.html
Distance matrix (manhattan) manhattan_dm.txt
Principal coordinate matrix (manhattan) manhattan_pc.txt
PCoA plot (morisita_horn) index.html
Distance matrix (morisita_horn) morisita_horn_dm.txt
Principal coordinate matrix (morisita_horn) morisita_horn_pc.txt
PCoA plot (pearson) index.html
Distance matrix (pearson) pearson_dm.txt
Principal coordinate matrix (pearson) pearson_pc.txt
PCoA plot (soergel) index.html
Distance matrix (soergel) soergel_dm.txt
Principal coordinate matrix (soergel) soergel_pc.txt
PCoA plot (spearman_approx) index.html
Distance matrix (spearman_approx) spearman_approx_dm.txt
Principal coordinate matrix (spearman_approx) spearman_approx_pc.txt
PCoA plot (specprof) index.html
Distance matrix (specprof) specprof_dm.txt
Principal coordinate matrix (specprof) specprof_pc.txt
PCoA plot (unifrac) index.html
Distance matrix (unifrac) unifrac_dm.txt
Principal coordinate matrix (unifrac) unifrac_pc.txt
PCoA plot (unweighted_unifrac) index.html
Distance matrix (unweighted_unifrac) unweighted_unifrac_dm.txt
Principal coordinate matrix (unweighted_unifrac) unweighted_unifrac_pc.txt
PCoA plot (unweighted_unifrac_full_tree) index.html
Distance matrix (unweighted_unifrac_full_tree) unweighted_unifrac_full_tree_dm.txt
Principal coordinate matrix (unweighted_unifrac_full_tree) unweighted_unifrac_full_tree_pc.txt
PCoA plot (weighted_normalized_unifrac) index.html
Distance matrix (weighted_normalized_unifrac) weighted_normalized_unifrac_dm.txt
Principal coordinate matrix (weighted_normalized_unifrac) weighted_normalized_unifrac_pc.txt
PCoA plot (weighted_unifrac) index.html
Distance matrix (weighted_unifrac) weighted_unifrac_dm.txt
Principal coordinate matrix (weighted_unifrac) weighted_unifrac_pc.txt

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