Genome Explorer: Pseudomonas fluorescens NEP1 (SEQF3789.1)
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Pseudomonas fluorescens NEP1 (SEQF3789.1)
NCBI Annotation for SEQF3789.1
| Genome selected: Pseudomonas fluorescens NEP1 | |||
| Contigs: | 1 | Bases: | 6313875 bps |
| CDS: | 71 | rRNA: | 9 |
| tmRNA: | 1 | tRNA: | 64 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5501 | CP022313.1 | AXJ08069.1 | open | 408 [NA] | 135 [AA] | 2182187->2182596 | CFN16_09835 | type IV secretion protein Rhs |
| 5502 | CP022313.1 | AXJ08070.1 | open | 423 [NA] | 141 [AA] | <2182608-2183030 | CFN16_09840 | Hcp1 family type VI secretion system effector |
| 5503 | CP022313.1 | AXJ08071.1 | open | 723 [NA] | 240 [AA] | 2223769-2224491 | CFN16_10050 | phosphatidylcholine synthase |
| 5504 | CP022313.1 | AXJ08072.1 | open | 822 [NA] | 273 [AA] | 2262561-2263382 | CFN16_10255 | hypothetical protein |
| 5505 | CP022313.1 | AXJ08073.1 | open | 627 [NA] | 208 [AA] | 2287105-2287731 | CFN16_10380 | DNA-3-methyladenine glycosylase |
| 5506 | CP022313.1 | AXJ08074.1 | open | 768 [NA] | 255 [AA] | 2324444-2325211 | CFN16_10545 | hydroxyacylglutathione hydrolase |
| 5507 | CP022313.1 | AXJ08075.1 | open | 1032 [NA] | 343 [AA] | 2348860-2349891 | CFN16_10645 | sterol desaturase |
| 5508 | CP022313.1 | AXJ08076.1 | open | 417 [NA] | 138 [AA] | 2352609-2353025 | CFN16_10665 | peroxiredoxin |
| 5509 | CP022313.1 | AXJ08077.1 | open | 1956 [NA] | 651 [AA] | 2386107-2388062 | CFN16_10710 | macrolide ABC transporter permease/ATP-binding protein MacB |
| 5510 | CP022313.1 | AXJ08078.1 | open | 864 [NA] | 287 [AA] | 2394749-2395612 | CFN16_10740 | AraC family transcriptional regulator |
| 5511 | CP022313.1 | AXJ08079.1 | open | 255 [NA] | 84 [AA] | 2461901-2462155 | CFN16_10960 | cloacin |
| 5512 | CP022313.1 | AXJ08080.1 | open | 1167 [NA] | 388 [AA] | 2463956-2465122 | CFN16_10975 | N-methyltryptophan oxidase |
| 5513 | CP022313.1 | AXJ08081.1 | open | 858 [NA] | 285 [AA] | 2465354-2466211 | CFN16_10980 | LysR family transcriptional regulator |
| 5514 | CP022313.1 | AXJ08082.1 | open | 447 [NA] | 148 [AA] | 2475365-2475811 | CFN16_11030 | GNAT family N-acetyltransferase |
| 5515 | CP022313.1 | AXJ08083.1 | open | 927 [NA] | 308 [AA] | 2491938-2492864 | CFN16_11100 | hydroxyproline-2-epimerase |
| 5516 | CP022313.1 | AXJ08084.1 | open | 339 [NA] | 112 [AA] | 2531159-2531497 | CFN16_11300 | bleomycin resistance family protein |
| 5517 | CP022313.1 | AXJ08085.1 | open | 266 [NA] | 88 [AA] | 2556502->2556767 | CFN16_11430 | hypothetical protein |
| 5518 | CP022313.1 | AXJ08086.1 | open | 288 [NA] | 95 [AA] | <2556779-2557068 | CFN16_11435 | IS4 family transposase |
| 5519 | CP022313.1 | AXJ08087.1 | open | 993 [NA] | 330 [AA] | 2569652-2570644 | CFN16_11490 | glycine betaine ABC transporter substrate-binding protein |
| 5520 | CP022313.1 | AXJ08088.1 | open | 606 [NA] | 201 [AA] | 2584955-2585560 | CFN16_11555 | TetR family transcriptional regulator |
| 5521 | CP022313.1 | AXJ08089.1 | open | 867 [NA] | 288 [AA] | 2593025-2593891 | CFN16_11600 | AraC family transcriptional regulator |
| 5522 | CP022313.1 | AXJ08090.1 | open | 1185 [NA] | 394 [AA] | 2613883-2615067 | CFN16_11705 | efflux transporter periplasmic adaptor subunit |
| 5523 | CP022313.1 | AXJ08091.1 | open | 1938 [NA] | 645 [AA] | 2647628-2649565 | CFN16_11870 | TonB-dependent receptor |
| 5524 | CP022313.1 | AXJ08092.1 | open | 1464 [NA] | 487 [AA] | 2655505-2656968 | CFN16_11910 | hypothetical protein |
| 5525 | CP022313.1 | AXJ08093.1 | open | 1527 [NA] | 508 [AA] | 2658376-2659902 | CFN16_11920 | sulfatase |
| 5526 | CP022313.1 | AXJ08094.1 | open | 462 [NA] | 153 [AA] | 2674862-2675323 | CFN16_11995 | DNA mismatch repair protein MutT |
| 5527 | CP022313.1 | AXJ08095.1 | open | 5127 [NA] | 1708 [AA] | 2686902-2692028 | CFN16_12070 | protein kinase |
| 5528 | CP022313.1 | AXJ08096.1 | open | 330 [NA] | 109 [AA] | 2723174-2723503 | CFN16_12270 | hypothetical protein |
| 5529 | CP022313.1 | AXJ08097.1 | open | 372 [NA] | 123 [AA] | 2732729-2733100 | CFN16_12350 | chemotaxis protein |
| 5530 | CP022313.1 | AXJ08098.1 | open | 270 [NA] | 89 [AA] | 2745871-2746140 | CFN16_12460 | hypothetical protein |
| 5531 | CP022313.1 | AXJ08099.1 | open | 798 [NA] | 265 [AA] | 2841874-2842671 | CFN16_12890 | hypothetical protein |
| 5532 | CP022313.1 | AXJ08100.1 | open | 1092 [NA] | 363 [AA] | 2889029-2890120 | CFN16_13080 | spermidine/putrescine ABC transporter substrate-binding protein PotF |
| 5533 | CP022313.1 | AXJ08101.1 | open | 900 [NA] | 299 [AA] | 2924869-2925768 | CFN16_13255 | lipid A hydroxylase LpxO |
| 5534 | CP022313.1 | AXJ08102.1 | open | 273 [NA] | 90 [AA] | 2990789-2991061 | CFN16_13530 | hypothetical protein |
| 5535 | CP022313.1 | AXJ08103.1 | open | 351 [NA] | 116 [AA] | 2997141-2997491 | CFN16_13560 | alkaline proteinase inhibitor |
| 5536 | CP022313.1 | AXJ08104.1 | open | 1419 [NA] | 472 [AA] | 3083917-3085335 | CFN16_13855 | MFS transporter |
| 5537 | CP022313.1 | AXJ08105.1 | open | 1080 [NA] | 359 [AA] | 3111027-3112106 | CFN16_13955 | glycosyl transferase |
| 5538 | CP022313.1 | AXJ08106.1 | open | 1359 [NA] | 452 [AA] | 3121811-3123169 | CFN16_14000 | glutamine synthetase |
| 5539 | CP022313.1 | AXJ08107.1 | open | 1596 [NA] | 531 [AA] | 3133333-3134928 | CFN16_14045 | iron ABC transporter permease |
| 5540 | CP022313.1 | AXJ08108.1 | open | 1596 [NA] | 531 [AA] | 3146100-3147695 | CFN16_14100 | glycosyltransferase |
| 5541 | CP022313.1 | AXJ08109.1 | open | 2028 [NA] | 675 [AA] | 3194312-3196339 | CFN16_14315 | hypothetical protein |
| 5542 | CP022313.1 | AXJ08110.1 | open | 978 [NA] | 325 [AA] | 3201715-3202692 | CFN16_14340 | bifunctional glyoxylate/hydroxypyruvate reductase B |
| 5543 | CP022313.1 | AXJ08111.1 | open | 444 [NA] | 147 [AA] | 3248739-3249182 | CFN16_14600 | GNAT family N-acetyltransferase |
| 5544 | CP022313.1 | AXJ08112.1 | open | 1026 [NA] | 341 [AA] | 3321344-3322369 | CFN16_14870 | ABC transporter permease |
| 5545 | CP022313.1 | AXJ08113.1 | open | 492 [NA] | 163 [AA] | 3328655-3329146 | CFN16_14895 | hypothetical protein |
| 5546 | CP022313.1 | AXJ08114.1 | open | 1011 [NA] | 336 [AA] | 3342449-3343459 | CFN16_14960 | transcriptional regulator |
| 5547 | CP022313.1 | AXJ08115.1 | open | 3078 [NA] | 1025 [AA] | 3361487-3364564 | CFN16_15040 | error-prone DNA polymerase |
| 5548 | CP022313.1 | AXJ08116.1 | open | 306 [NA] | 101 [AA] | 3444752-3445057 | CFN16_15360 | hypothetical protein |
| 5549 | CP022313.1 | AXJ08117.1 | open | 477 [NA] | 158 [AA] | 3461474-3461950 | CFN16_15435 | hypothetical protein |
| 5550 | CP022313.1 | AXJ08118.1 | open | 936 [NA] | 311 [AA] | 3481433-3482368 | CFN16_15535 | peroxidase |
| 5551 | CP022313.1 | AXJ08119.1 | open | 525 [NA] | 174 [AA] | 3489913-3490437 | CFN16_15580 | hypothetical protein |
| 5552 | CP022313.1 | AXJ08120.1 | open | 882 [NA] | 293 [AA] | 3512675-3513556 | CFN16_15655 | LysR family transcriptional regulator |
| 5553 | CP022313.1 | AXJ08121.1 | open | 1170 [NA] | 389 [AA] | 3516977-3518146 | CFN16_15675 | hypothetical protein |
| 5554 | CP022313.1 | AXJ08122.1 | open | 3030 [NA] | 1009 [AA] | 3518262-3521291 | CFN16_15680 | hypothetical protein |
| 5555 | CP022313.1 | AXJ08123.1 | open | 1425 [NA] | 474 [AA] | 3531250-3532674 | CFN16_15725 | aldehyde dehydrogenase |
| 5556 | CP022313.1 | AXJ08124.1 | open | 1416 [NA] | 471 [AA] | 3621278-3622693 | CFN16_16225 | cytochrome ubiquinol oxidase subunit I |
| 5557 | CP022313.1 | AXJ08125.1 | open | 447 [NA] | 148 [AA] | 3645913-3646359 | CFN16_16315 | type VI secretion protein |
| 5558 | CP022313.1 | AXJ08126.1 | open | 603 [NA] | 200 [AA] | 3662563-3663165 | CFN16_16395 | hypothetical protein |
| 5559 | CP022313.1 | AXJ08127.1 | open | 624 [NA] | 207 [AA] | 3674497-3675120 | CFN16_16450 | aromatic acid decarboxylase |
| 5560 | CP022313.1 | AXJ08128.1 | open | 927 [NA] | 308 [AA] | 3717307-3718233 | CFN16_16645 | cation transporter |
| 5561 | CP022313.1 | AXJ08129.1 | open | 597 [NA] | 198 [AA] | 3724941-3725537 | CFN16_16705 | LemA family protein |
| 5562 | CP022313.1 | AXJ08130.1 | open | 315 [NA] | 104 [AA] | 3735505-3735819 | CFN16_16750 | (2Fe-2S)-binding protein |
| 5563 | CP022313.1 | AXJ08131.1 | open | 642 [NA] | 213 [AA] | 3769070-3769711 | CFN16_16960 | TetR family transcriptional regulator |
| 5564 | CP022313.1 | AXJ08132.1 | open | 393 [NA] | 130 [AA] | 3778427-3778819 | CFN16_17025 | sulfurtransferase complex subunit TusD |
| 5565 | CP022313.1 | AXJ08133.1 | open | 345 [NA] | 114 [AA] | 3824517-3824861 | CFN16_17245 | toxin |
| 5566 | CP022313.1 | AXJ08134.1 | open | 657 [NA] | 218 [AA] | 3880897-3881553 | CFN16_17475 | Cro/Cl family transcriptional regulator |
| 5567 | CP022313.1 | AXJ08135.1 | open | 1233 [NA] | 410 [AA] | 3933316-3934548 | CFN16_17735 | serine/threonine transporter SstT |
| 5568 | CP022313.1 | AXJ08136.1 | open | 1347 [NA] | 448 [AA] | 3942669-3944015 | CFN16_17795 | MFS transporter |
| 5569 | CP022313.1 | AXJ08137.1 | open | 750 [NA] | 249 [AA] | 3953787-3954536 | CFN16_17850 | hypothetical protein |
| 5570 | CP022313.1 | AXJ08138.1 | open | 2700 [NA] | 899 [AA] | 3964178-3966877 | CFN16_17900 | energy transducer TonB |
| 5571 | CP022313.1 | AXJ08139.1 | open | 1035 [NA] | 344 [AA] | 4026525-4027559 | CFN16_18140 | AraC family transcriptional regulator |
| 5572 | CP022313.1 | AXJ08140.1 | open | 1062 [NA] | 353 [AA] | 4072983-4074044 | CFN16_18345 | capsular biosynthesis protein |
| 5573 | CP022313.1 | AXJ08141.1 | open | 1785 [NA] | 594 [AA] | 4131498-4133282 | CFN16_18605 | ABC transporter ATP-binding protein |
| 5574 | CP022313.1 | AXJ08142.1 | open | 816 [NA] | 271 [AA] | 4141193-4142008 | CFN16_18640 | 3'-kinase |
| 5575 | CP022313.1 | AXJ08143.1 | open | 201 [NA] | 66 [AA] | 4149356-4149556 | CFN16_18680 | hypothetical protein |
| 5576 | CP022313.1 | AXJ08144.1 | open | 564 [NA] | 187 [AA] | 4178901-4179464 | CFN16_18815 | FMN reductase |
| 5577 | CP022313.1 | AXJ08145.1 | open | 1617 [NA] | 538 [AA] | 4320494-4322110 | CFN16_19480 | glycosyl transferase |
| 5578 | CP022313.1 | AXJ08146.1 | open | 969 [NA] | 322 [AA] | 4423345-4424313 | CFN16_19920 | L-arabinose ABC transporter permease AraH |
| 5579 | CP022313.1 | AXJ08147.1 | open | 990 [NA] | 329 [AA] | 4444228-4445217 | CFN16_20040 | signal peptide peptidase SppA |
| 5580 | CP022313.1 | AXJ08148.1 | open | 750 [NA] | 249 [AA] | 4483834-4484583 | CFN16_20240 | DNA-binding response regulator |
| 5581 | CP022313.1 | AXJ08149.1 | open | 834 [NA] | 277 [AA] | 4503397-4504230 | CFN16_20335 | nucleoside triphosphate pyrophosphohydrolase |
| 5582 | CP022313.1 | AXJ08150.1 | open | 2754 [NA] | 917 [AA] | 4511442-4514195 | CFN16_20365 | hybrid sensor histidine kinase/response regulator |
| 5583 | CP022313.1 | AXJ08151.1 | open | 1053 [NA] | 350 [AA] | 4605695-4606747 | CFN16_20810 | diguanylate cyclase AdrA |
| 5584 | CP022313.1 | AXJ08152.1 | open | 942 [NA] | 313 [AA] | 4608249-4609190 | CFN16_20820 | LysR family transcriptional regulator |
| 5585 | CP022313.1 | AXJ08153.1 | open | 873 [NA] | 290 [AA] | 4633538-4634410 | CFN16_20970 | LysR family transcriptional regulator |
| 5586 | CP022313.1 | AXJ08154.1 | open | 2139 [NA] | 712 [AA] | 4679478-4681616 | CFN16_21190 | chemotaxis protein |
| 5587 | CP022313.1 | AXJ08155.1 | open | 1488 [NA] | 495 [AA] | 4731460-4732947 | CFN16_21435 | ATP-binding protein |
| 5588 | CP022313.1 | AXJ08156.1 | open | 978 [NA] | 325 [AA] | 4742471-4743448 | CFN16_21480 | hypothetical protein |
| 5589 | CP022313.1 | AXJ08157.1 | open | 1452 [NA] | 483 [AA] | 4784200-4785651 | CFN16_21635 | aldehyde dehydrogenase |
| 5590 | CP022313.1 | AXJ08158.1 | open | 1242 [NA] | 413 [AA] | 4885699-4886940 | CFN16_22075 | hypothetical protein |
| 5591 | CP022313.1 | AXJ08159.1 | open | 942 [NA] | 313 [AA] | 5023130-5024071 | CFN16_22710 | 16S rRNA (cytosine(1402)-N(4))-methyltransferase |
| 5592 | CP022313.1 | AXJ08160.1 | open | 630 [NA] | 209 [AA] | 5041211-5041840 | CFN16_22810 | alpha/beta hydrolase |
| 5593 | CP022313.1 | AXJ08161.1 | open | 687 [NA] | 228 [AA] | <5045556-5046242 | CFN16_22835 | hypothetical protein |
| 5594 | CP022313.1 | AXJ08162.1 | open | 1185 [NA] | 394 [AA] | 5054705-5055889 | CFN16_22860 | MFS transporter |
| 5595 | CP022313.1 | AXJ08163.1 | open | 774 [NA] | 257 [AA] | 5055974-5056747 | CFN16_22865 | AraC family transcriptional regulator |
| 5596 | CP022313.1 | AXJ08164.1 | open | 1725 [NA] | 574 [AA] | 5133534-5135258 | CFN16_23260 | acetolactate synthase, large subunit, biosynthetic type |
| 5597 | CP022313.1 | AXJ08165.1 | open | 978 [NA] | 325 [AA] | 5234695-5235672 | CFN16_23750 | GTPase |
| 5598 | CP022313.1 | AXJ08166.1 | open | 552 [NA] | 183 [AA] | 5249886-5250437 | CFN16_23820 | DJ-1 family protein |
| 5599 | CP022313.1 | AXJ08167.1 | open | 1242 [NA] | 413 [AA] | 5273394-5274635 | CFN16_23940 | aminoacetone oxidase family FAD-binding enzyme |
| 5600 | CP022313.1 | AXJ08168.1 | open | 675 [NA] | 224 [AA] | 5280140-5280814 | CFN16_23975 | hypothetical protein |
| 5601 | CP022313.1 | AXJ08169.1 | open | 1464 [NA] | 487 [AA] | 5295989-5297452 | CFN16_24050 | AMP nucleosidase |
| 5602 | CP022313.1 | AXJ08170.1 | open | 3294 [NA] | 1097 [AA] | 5335067-5338360 | CFN16_24235 | hypothetical protein |
| 5603 | CP022313.1 | AXJ08171.1 | open | 465 [NA] | 154 [AA] | 5387380-5387844 | CFN16_24465 | hypothetical protein |
| 5604 | CP022313.1 | AXJ08172.1 | open | 519 [NA] | 172 [AA] | 5392506-5393024 | CFN16_24500 | hypothetical protein |
| 5605 | CP022313.1 | AXJ08173.1 | open | 1113 [NA] | 370 [AA] | 5453987->5455099 | CFN16_24835 | elongation factor Tu |
| 5606 | CP022313.1 | AXJ08174.1 | open | 380 [NA] | 127 [AA] | <5455111-5455490 | CFN16_24840 | elongation factor Tu |
| 5607 | CP022313.1 | AXJ08175.1 | open | 1281 [NA] | 426 [AA] | 5496105-5497385 | CFN16_25055 | molecular chaperone SurA |
| 5608 | CP022313.1 | AXJ08176.1 | open | 75 [NA] | 24 [AA] | 5525032-5525106 | CFN16_25175 | pyrroloquinoline quinone precursor peptide PqqA |
| 5609 | CP022313.1 | AXJ08177.1 | open | 156 [NA] | 51 [AA] | 5587961-5588116 | CFN16_25455 | protein GbcA |
| 5610 | CP022313.1 | AXJ08178.1 | open | 1869 [NA] | 622 [AA] | 5590783-5592651 | CFN16_25470 | hypothetical protein |
| 5611 | CP022313.1 | AXJ08179.1 | open | 402 [NA] | 133 [AA] | 5605428-5605829 | CFN16_25510 | hypothetical protein |
| 5612 | CP022313.1 | AXJ08180.1 | open | 594 [NA] | 197 [AA] | 5673572-5674165 | CFN16_25810 | hypothetical protein |
| 5613 | CP022313.1 | AXJ08181.1 | open | 366 [NA] | 121 [AA] | 5700017-5700382 | CFN16_25920 | response regulator |
| 5614 | CP022313.1 | AXJ08182.1 | open | 768 [NA] | 255 [AA] | 5784465-5785232 | CFN16_26375 | hypothetical protein |
| 5615 | CP022313.1 | AXJ08183.1 | open | 1248 [NA] | 415 [AA] | 5791539-5792786 | CFN16_26400 | integrase |
| 5616 | CP022313.1 | AXJ08184.1 | open | 219 [NA] | 72 [AA] | 5807299-5807517 | CFN16_26475 | hypothetical protein |
| 5617 | CP022313.1 | AXJ08185.1 | open | 1230 [NA] | 409 [AA] | 5807528-5808757 | CFN16_26480 | D-3-phosphoglycerate dehydrogenase |
| 5618 | CP022313.1 | AXJ08186.1 | open | 660 [NA] | 219 [AA] | 5945871-5946530 | CFN16_27130 | heteromeric transposase endonuclease subunit TnsA |
| 5619 | CP022313.1 | AXJ08187.1 | open | 423 [NA] | 140 [AA] | 6016840-6017262 | CFN16_27495 | hypothetical protein |
| 5620 | CP022313.1 | AXJ08188.1 | open | 4599 [NA] | 1532 [AA] | 6090032-6094630 | CFN16_27825 | hypothetical protein |
| 5621 | CP022313.1 | AXJ08189.1 | open | 1125 [NA] | 374 [AA] | 6165036-6166160 | CFN16_28130 | cell filamentation protein Fic |
| 5622 | CP022313.1 | AXJ08190.1 | open | 954 [NA] | 317 [AA] | 6199521-6200474 | CFN16_28290 | glycine--tRNA ligase subunit alpha |
| 5623 | CP022313.1 | AXJ08191.1 | open | 915 [NA] | 304 [AA] | 6216139-6217053 | CFN16_28375 | coproporphyrinogen III oxidase |
| 5624 | CP022313.1 | AXJ08192.1 | open | 2052 [NA] | 683 [AA] | 6288644-6290695 | CFN16_28725 | oligopeptidase A |
| 5625 | CP022313.1 | AXJ08193.1 | open | 900 [NA] | 299 [AA] | 6309900-6310799 | CFN16_28850 | LysR family transcriptional regulator |