Genome Explorer: Lactiplantibacillus plantarum SRCM101105 (SEQF4190.1)
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NCBI Annotation for SEQF4190.1
| Genome selected: Lactiplantibacillus plantarum SRCM101105 | |||
| Contigs: | 4 | Bases: | 3344317 bps |
| CDS: | 3104 | rRNA: | 16 |
| tmRNA: | 1 | tRNA: | 67 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3001 | CP028223.1 | QHM35664.1 | open | 894 [NA] | 297 [AA] | 43653-44546 | C7M35_03085 | hypothetical protein |
| 3002 | CP028223.1 | QHM35665.1 | open | 1374 [NA] | 457 [AA] | 44647-46020 | C7M35_03086 | RNA polymerase sigma factor SigA |
| 3003 | CP028223.1 | QHM35666.1 | open | 3279 [NA] | 1092 [AA] | 46041-49319 | C7M35_03087 | ATP-dependent DNA helicase RecQ |
| 3004 | CP028223.1 | QHM35667.1 | open | 249 [NA] | 82 [AA] | 49758-50006 | C7M35_03088 | hypothetical protein |
| 3005 | CP028223.1 | QHM35668.1 | open | 324 [NA] | 107 [AA] | 50127-50450 | C7M35_03089 | hypothetical protein |
| 3006 | CP028223.1 | QHM35669.1 | open | 1176 [NA] | 391 [AA] | 50559-51734 | C7M35_03090 | hypothetical protein |
| 3007 | CP028223.1 | QHM35670.1 | open | 453 [NA] | 150 [AA] | 51822-52274 | C7M35_03091 | hypothetical protein |
| 3008 | CP028223.1 | QHM35671.1 | open | 279 [NA] | 92 [AA] | 52331-52609 | C7M35_03092 | hypothetical protein |
| 3009 | CP028223.1 | QHM35672.1 | open | 1014 [NA] | 337 [AA] | 52674-53687 | C7M35_03093 | hypothetical protein |
| 3010 | CP028223.1 | QHM35673.1 | open | 555 [NA] | 184 [AA] | 53889-54443 | C7M35_03094 | Serine recombinase PinR |
| 3011 | CP028223.1 | QHM35674.1 | open | 183 [NA] | 60 [AA] | 54903-55085 | C7M35_03095 | hypothetical protein |
| 3012 | CP028223.1 | QHM35675.1 | open | 2538 [NA] | 845 [AA] | 55041-57578 | C7M35_03096 | Transcriptional regulatory protein DagR |
| 3013 | CP028223.1 | QHM35676.1 | open | 435 [NA] | 144 [AA] | 57803-58237 | C7M35_03097 | PTS system fructose-specific EIIA component |
| 3014 | CP028223.1 | QHM35677.1 | open | 495 [NA] | 164 [AA] | 58253-58747 | C7M35_03098 | PTS system fructose-specific EIIB component |
| 3015 | CP028223.1 | QHM35678.1 | open | 849 [NA] | 282 [AA] | 58781-59629 | C7M35_03099 | PTS system mannose-specific EIIC component |
| 3016 | CP028223.1 | QHM35679.1 | open | 846 [NA] | 281 [AA] | 59632-60477 | C7M35_03100 | PTS system mannose-specific EIID component |
| 3017 | CP028223.1 | QHM35680.1 | open | 333 [NA] | 110 [AA] | 60511-60843 | C7M35_03101 | hypothetical protein |
| 3018 | CP028223.1 | QHM35681.1 | open | 129 [NA] | 42 [AA] | 61976-62104 | C7M35_03102 | hypothetical protein |
| 3019 | CP028224.1 | QHM35682.1 | open | 102 [NA] | 33 [AA] | 846-947 | C7M35_03103 | hypothetical protein |
| 3020 | CP028224.1 | QHM35683.1 | open | 372 [NA] | 123 [AA] | 1487-1858 | C7M35_03104 | hypothetical protein |
| 3021 | CP028224.1 | QHM35684.1 | open | 432 [NA] | 143 [AA] | 1831-2262 | C7M35_03105 | hypothetical protein |
| 3022 | CP028224.1 | QHM35685.1 | open | 1155 [NA] | 384 [AA] | 2347-3501 | C7M35_03106 | Na(+)/H(+) antiporter |
| 3023 | CP028224.1 | QHM35686.1 | open | 432 [NA] | 143 [AA] | 3872-4303 | C7M35_03107 | hypothetical protein |
| 3024 | CP028224.1 | QHM35687.1 | open | 372 [NA] | 123 [AA] | 4276-4647 | C7M35_03108 | hypothetical protein |
| 3025 | CP028224.1 | QHM35688.1 | open | 903 [NA] | 300 [AA] | 4755-5657 | C7M35_03109 | hypothetical protein |
| 3026 | CP028224.1 | QHM35689.1 | open | 633 [NA] | 210 [AA] | 5744-6376 | C7M35_03110 | Putative transposon Tn552 DNA-invertase bin3 |
| 3027 | CP028224.1 | QHM35690.1 | open | 813 [NA] | 270 [AA] | 6490-7302 | C7M35_03111 | hypothetical protein |
| 3028 | CP028224.1 | QHM35691.1 | open | 951 [NA] | 316 [AA] | 7430-8380 | C7M35_03112 | Ribonucleoside-diphosphate reductase subunit beta nrdF2 |
| 3029 | CP028224.1 | QHM35692.1 | open | 927 [NA] | 308 [AA] | 8395-9321 | C7M35_03113 | Ribonucleoside-diphosphate reductase 2 subunit beta |
| 3030 | CP028224.1 | QHM35693.1 | open | 2169 [NA] | 722 [AA] | 9428-11596 | C7M35_03114 | Ribonucleoside-diphosphate reductase 2 subunit alpha |
| 3031 | CP028224.1 | QHM35694.1 | open | 438 [NA] | 145 [AA] | 11603-12040 | C7M35_03115 | Putative NrdI-like protein |
| 3032 | CP028224.1 | QHM35695.1 | open | 360 [NA] | 119 [AA] | 12822-13181 | C7M35_03116 | hypothetical protein |
| 3033 | CP028224.1 | QHM35696.1 | open | 156 [NA] | 51 [AA] | 13290-13445 | C7M35_03117 | hypothetical protein |
| 3034 | CP028224.1 | QHM35697.1 | open | 555 [NA] | 184 [AA] | 14024-14578 | C7M35_03118 | Serine recombinase PinR |
| 3035 | CP028224.1 | QHM35698.1 | open | 438 [NA] | 145 [AA] | 14956-15393 | C7M35_03119 | putative HTH-type transcriptional regulator YusO |
| 3036 | CP028224.1 | QHM35699.1 | open | 2037 [NA] | 678 [AA] | 15777-17813 | C7M35_03120 | Low affinity potassium transport system protein kup |
| 3037 | CP028224.1 | QHM35700.1 | open | 738 [NA] | 245 [AA] | 17979-18716 | C7M35_03121 | KDP operon transcriptional regulatory protein KdpE |
| 3038 | CP028224.1 | QHM35701.1 | open | 1176 [NA] | 391 [AA] | 18804-19979 | C7M35_03122 | hypothetical protein |
| 3039 | CP028224.1 | QHM35702.1 | open | 213 [NA] | 70 [AA] | 20108-20320 | C7M35_03123 | hypothetical protein |
| 3040 | CP028224.1 | QHM35703.1 | open | 1401 [NA] | 466 [AA] | 20627-22027 | C7M35_03124 | putative transport protein HsrA |
| 3041 | CP028224.1 | QHM35704.1 | open | 663 [NA] | 220 [AA] | 22027-22689 | C7M35_03125 | hypothetical protein |
| 3042 | CP028224.1 | QHM35705.1 | open | 1155 [NA] | 384 [AA] | 22679-23833 | C7M35_03126 | Adenosylhomocysteinase |
| 3043 | CP028224.1 | QHM35706.1 | open | 1227 [NA] | 408 [AA] | 24214-25440 | C7M35_03127 | hypothetical protein |
| 3044 | CP028224.1 | QHM35707.1 | open | 174 [NA] | 57 [AA] | 25748-25921 | C7M35_03128 | hypothetical protein |
| 3045 | CP028224.1 | QHM35708.1 | open | 258 [NA] | 85 [AA] | 26033-26290 | C7M35_03129 | hypothetical protein |
| 3046 | CP028224.1 | QHM35709.1 | open | 267 [NA] | 88 [AA] | 26297-26563 | C7M35_03130 | hypothetical protein |
| 3047 | CP028224.1 | QHM35710.1 | open | 474 [NA] | 157 [AA] | 26607-27080 | C7M35_03131 | DNA topoisomerase 3 |
| 3048 | CP028224.1 | QHM35711.1 | open | 2061 [NA] | 686 [AA] | 27332-29392 | C7M35_03132 | Mobilization protein A |
| 3049 | CP028224.1 | QHM35712.1 | open | 210 [NA] | 69 [AA] | 29662-29871 | C7M35_03133 | hypothetical protein |
| 3050 | CP028224.1 | QHM35713.1 | open | 291 [NA] | 96 [AA] | 29894-30184 | C7M35_03134 | hypothetical protein |
| 3051 | CP028224.1 | QHM35714.1 | open | 876 [NA] | 291 [AA] | 30207-31082 | C7M35_03135 | hypothetical protein |
| 3052 | CP028224.1 | QHM35715.1 | open | 708 [NA] | 235 [AA] | 31091-31798 | C7M35_03136 | hypothetical protein |
| 3053 | CP028224.1 | QHM35716.1 | open | 507 [NA] | 168 [AA] | 31868-32374 | C7M35_03137 | hypothetical protein |
| 3054 | CP028224.1 | QHM35717.1 | open | 282 [NA] | 93 [AA] | 32364-32645 | C7M35_03138 | hypothetical protein |
| 3055 | CP028224.1 | QHM35718.1 | open | 333 [NA] | 110 [AA] | 33313-33645 | C7M35_03139 | hypothetical protein |
| 3056 | CP028224.1 | QHM35719.1 | open | 207 [NA] | 68 [AA] | 34010-34216 | C7M35_03140 | hypothetical protein |
| 3057 | CP028224.1 | QHM35720.1 | open | 861 [NA] | 286 [AA] | 34593-35453 | C7M35_03141 | Sporulation initiation inhibitor protein Soj |
| 3058 | CP028224.1 | QHM35721.1 | open | 300 [NA] | 99 [AA] | 35455-35754 | C7M35_03142 | hypothetical protein |
| 3059 | CP028224.1 | QHM35722.1 | open | 930 [NA] | 309 [AA] | 35792-36721 | C7M35_03143 | hypothetical protein |
| 3060 | CP028224.1 | QHM35723.1 | open | 966 [NA] | 321 [AA] | 36876-37841 | C7M35_03144 | hypothetical protein |
| 3061 | CP028224.1 | QHM35724.1 | open | 918 [NA] | 305 [AA] | 38087-39004 | C7M35_03145 | Glycine betaine/carnitine transport binding protein GbuC |
| 3062 | CP028224.1 | QHM35725.1 | open | 840 [NA] | 279 [AA] | 39012-39851 | C7M35_03146 | Glycine betaine/carnitine transport permease protein GbuB |
| 3063 | CP028224.1 | QHM35726.1 | open | 1197 [NA] | 398 [AA] | 39851-41047 | C7M35_03147 | Glycine betaine/carnitine transport ATP-binding protein GbuA |
| 3064 | CP028224.1 | QHM35727.1 | open | 1026 [NA] | 341 [AA] | 41425-42450 | C7M35_03148 | hypothetical protein |
| 3065 | CP028224.1 | QHM35728.1 | open | 717 [NA] | 238 [AA] | 42833-43549 | C7M35_03149 | putative cell wall hydrolase LytN |
| 3066 | CP028224.1 | QHM35729.1 | open | 147 [NA] | 48 [AA] | 44473-44619 | C7M35_03150 | hypothetical protein |
| 3067 | CP028224.1 | QHM35730.1 | open | 1227 [NA] | 408 [AA] | 44846-46072 | C7M35_03151 | hypothetical protein |
| 3068 | CP028224.1 | QHM35731.1 | open | 174 [NA] | 57 [AA] | 46379-46552 | C7M35_03152 | hypothetical protein |
| 3069 | CP028224.1 | QHM35732.1 | open | 189 [NA] | 62 [AA] | 46845-47033 | C7M35_03153 | hypothetical protein |
| 3070 | CP028225.1 | QHM35733.1 | open | 138 [NA] | 45 [AA] | 283-420 | C7M35_03154 | hypothetical protein |
| 3071 | CP028225.1 | QHM35734.1 | open | 234 [NA] | 77 [AA] | 525-758 | C7M35_03155 | hypothetical protein |
| 3072 | CP028225.1 | QHM35735.1 | open | 897 [NA] | 298 [AA] | 751-1647 | C7M35_03156 | Sporulation initiation inhibitor protein Soj |
| 3073 | CP028225.1 | QHM35736.1 | open | 1140 [NA] | 379 [AA] | 2698-3837 | C7M35_03157 | Trehalose import ATP-binding protein SugC |
| 3074 | CP028225.1 | QHM35737.1 | open | 1299 [NA] | 432 [AA] | 3965-5263 | C7M35_03158 | Multiple sugar-binding protein |
| 3075 | CP028225.1 | QHM35738.1 | open | 855 [NA] | 284 [AA] | 5269-6123 | C7M35_03159 | sn-glycerol-3-phosphate transport system permease protein UgpA |
| 3076 | CP028225.1 | QHM35739.1 | open | 816 [NA] | 271 [AA] | 6127-6942 | C7M35_03160 | L-arabinose transport system permease protein AraQ |
| 3077 | CP028225.1 | QHM35740.1 | open | 618 [NA] | 205 [AA] | 7013-7630 | C7M35_03161 | hypothetical protein |
| 3078 | CP028225.1 | QHM35741.1 | open | 198 [NA] | 65 [AA] | 7780-7977 | C7M35_03162 | hypothetical protein |
| 3079 | CP028225.1 | QHM35742.1 | open | 207 [NA] | 68 [AA] | 7979-8185 | C7M35_03163 | hypothetical protein |
| 3080 | CP028225.1 | QHM35743.1 | open | 318 [NA] | 105 [AA] | 8218-8535 | C7M35_03164 | hypothetical protein |
| 3081 | CP028225.1 | QHM35744.1 | open | 282 [NA] | 93 [AA] | 8657-8938 | C7M35_03165 | hypothetical protein |
| 3082 | CP028225.1 | QHM35745.1 | open | 210 [NA] | 69 [AA] | 8961-9170 | C7M35_03166 | hypothetical protein |
| 3083 | CP028225.1 | QHM35746.1 | open | 2064 [NA] | 687 [AA] | 9441-11504 | C7M35_03167 | Mobilization protein A |
| 3084 | CP028225.1 | QHM35747.1 | open | 666 [NA] | 221 [AA] | 11547-12212 | C7M35_03168 | hypothetical protein |
| 3085 | CP028225.1 | QHM35748.1 | open | 411 [NA] | 136 [AA] | 12227-12637 | C7M35_03169 | hypothetical protein |
| 3086 | CP028225.1 | QHM35749.1 | open | 2136 [NA] | 711 [AA] | 12644-14779 | C7M35_03170 | DNA topoisomerase 3 |
| 3087 | CP028225.1 | QHM35750.1 | open | 216 [NA] | 71 [AA] | 14901-15116 | C7M35_03171 | hypothetical protein |
| 3088 | CP028225.1 | QHM35751.1 | open | 1125 [NA] | 374 [AA] | 15120-16244 | C7M35_03172 | hypothetical protein |
| 3089 | CP028225.1 | QHM35752.1 | open | 114 [NA] | 37 [AA] | 16415-16528 | C7M35_03173 | hypothetical protein |
| 3090 | CP028225.1 | QHM35753.1 | open | 1239 [NA] | 412 [AA] | 16675-17913 | C7M35_03174 | hypothetical protein |
| 3091 | CP028225.1 | QHM35754.1 | open | 1623 [NA] | 540 [AA] | 17903-19525 | C7M35_03175 | putative type I restriction enzymeP M protein |
| 3092 | CP028225.1 | QHM35755.1 | open | 3168 [NA] | 1055 [AA] | 19539-22706 | C7M35_03176 | Type-1 restriction enzyme R protein |
| 3093 | CP028225.1 | QHM35756.1 | open | 1548 [NA] | 515 [AA] | 23078-24625 | C7M35_03177 | ATP-dependent DNA helicase PcrA |
| 3094 | CP028225.1 | QHM35757.1 | open | 1989 [NA] | 662 [AA] | 24642-26630 | C7M35_03178 | DNA replication and repair protein RecF |
| 3095 | CP028225.1 | QHM35758.1 | open | 588 [NA] | 195 [AA] | 26858-27445 | C7M35_03179 | Putative transposon Tn552 DNA-invertase bin3 |
| 3096 | CP028225.1 | QHM35759.1 | open | 1029 [NA] | 342 [AA] | 27557-28585 | C7M35_03180 | hypothetical protein |
| 3097 | CP028225.1 | QHM35760.1 | open | 1599 [NA] | 532 [AA] | 28953-30551 | C7M35_03181 | Aspartate-proton symporter |
| 3098 | CP028225.1 | QHM35761.1 | open | 924 [NA] | 307 [AA] | 30759-31682 | C7M35_03182 | hypothetical protein |
| 3099 | CP028225.1 | QHM35762.1 | open | 555 [NA] | 184 [AA] | 31849-32403 | C7M35_03183 | Serine recombinase PinR |
| 3100 | CP028225.1 | QHM35763.1 | open | 177 [NA] | 58 [AA] | 33090-33266 | C7M35_03184 | hypothetical protein |
| 3101 | CP028225.1 | QHM35764.1 | open | 219 [NA] | 72 [AA] | 33266-33484 | C7M35_03185 | hypothetical protein |
| 3102 | CP028225.1 | QHM35765.1 | open | 720 [NA] | 239 [AA] | 33633-34352 | C7M35_03186 | hypothetical protein |
| 3103 | CP028225.1 | QHM35766.1 | open | 459 [NA] | 152 [AA] | 34545-35003 | C7M35_03187 | hypothetical protein |
| 3104 | CP028225.1 | QHM35767.1 | open | 96 [NA] | 31 [AA] | 35661-35756 | C7M35_03188 | hypothetical protein |