Genome Explorer: Treponema pallidum CDC-1 (SEQF8048.1)
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NCBI Annotation for SEQF8048.1
| Genome selected: Treponema pallidum CDC-1 | |||
| Contigs: | 1 | Bases: | 1139578 bps |
| CDS: | 1064 | rRNA: | 6 |
| tmRNA: | 0 | tRNA: | 45 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1001 | CP024750.1 | AZN66877.1 | open | 1164 [NA] | 387 [AA] | 1066042-1067205 | TPECDC1_0981 | hypothetical protein |
| 1002 | CP024750.1 | AZN66878.1 | open | 627 [NA] | 208 [AA] | 1067221-1067847 | TPECDC1_0982 | rhomboid family protein |
| 1003 | CP024750.1 | AZN66879.1 | open | 717 [NA] | 238 [AA] | 1067837-1068553 | TPECDC1_0983 | hypothetical protein |
| 1004 | CP024750.1 | AZN66880.1 | open | 1920 [NA] | 639 [AA] | 1068577-1070496 | TPECDC1_0984 | chaperone HtpG |
| 1005 | CP024750.1 | AZN66881.1 | open | 315 [NA] | 104 [AA] | 1070466-1070780 | TPECDC1_0984a | hypothetical protein |
| 1006 | CP024750.1 | AZN66882.1 | open | 1770 [NA] | 589 [AA] | 1070679-1072448 | TPECDC1_0985 | aspartate--tRNA ligase |
| 1007 | CP024750.1 | AZN66883.1 | open | 885 [NA] | 294 [AA] | 1072506-1073390 | TPECDC1_0986 | DMT superfamily drug/metabolite transporter |
| 1008 | CP024750.1 | AZN66884.1 | open | 423 [NA] | 140 [AA] | 1073436-1073858 | TPECDC1_0987 | hypothetical protein |
| 1009 | CP024750.1 | AZN66885.1 | open | 600 [NA] | 199 [AA] | 1073910-1074509 | TPECDC1_0988 | MarC family multiple antibiotic resistance transporter |
| 1010 | CP024750.1 | AZN66886.1 | open | 873 [NA] | 290 [AA] | 1074545-1075417 | TPECDC1_0989 | hypothetical protein |
| 1011 | CP024750.1 | AZN66887.1 | open | 234 [NA] | 77 [AA] | 1075224-1075457 | TPECDC1_0989a | hypothetical protein |
| 1012 | CP024750.1 | AZN66888.1 | open | 3102 [NA] | 1033 [AA] | 1075464-1078565 | TPECDC1_0990 | hypothetical protein |
| 1013 | CP024750.1 | AZN66889.1 | open | 159 [NA] | 52 [AA] | 1078629-1078787 | TPECDC1_0991 | rubredoxin |
| 1014 | CP024750.1 | AZN66890.1 | open | 288 [NA] | 95 [AA] | 1078820-1079107 | TPECDC1_0992 | hypothetical protein |
| 1015 | CP024750.1 | AZN66891.1 | open | 1026 [NA] | 341 [AA] | 1079176-1080201 | TPECDC1_0993 | putative rare lipoprotein A |
| 1016 | CP024750.1 | AZN66892.1 | open | 297 [NA] | 98 [AA] | 1080395-1080691 | TPECDC1_0993a | hypothetical protein |
| 1017 | CP024750.1 | AZN66893.1 | open | 810 [NA] | 269 [AA] | 1080557-1081366 | TPECDC1_0994 | magnesium (Mg2+)-dependent deoxyribonuclease |
| 1018 | CP024750.1 | AZN66894.1 | open | 1335 [NA] | 444 [AA] | 1081448-1082782 | TPECDC1_0995 | putative CAP family transcription factor |
| 1019 | CP024750.1 | AZN66895.1 | open | 1677 [NA] | 558 [AA] | 1082812-1084488 | TPECDC1_0996 | hypothetical protein |
| 1020 | CP024750.1 | AZN66896.1 | open | 1809 [NA] | 602 [AA] | 1084585-1086393 | TPECDC1_0997 | signal peptide peptidase A |
| 1021 | CP024750.1 | AZN66897.1 | open | 1389 [NA] | 462 [AA] | 1086415-1087803 | TPECDC1_0998 | sodium/alanine symporter family protein |
| 1022 | CP024750.1 | AZN66898.1 | open | 2400 [NA] | 799 [AA] | 1087989-1090388 | TPECDC1_0999 | S-DNA-T family septal DNA translocator |
| 1023 | CP024750.1 | AZN66899.1 | open | 672 [NA] | 223 [AA] | 1090566-1091237 | TPECDC1_1000 | hypothetical protein |
| 1024 | CP024750.1 | AZN66900.1 | open | 1182 [NA] | 393 [AA] | 1091377-1092558 | TPECDC1_1001 | hypothetical protein |
| 1025 | CP024750.1 | AZN66901.1 | open | 756 [NA] | 251 [AA] | 1092572-1093327 | TPECDC1_1002 | hypothetical protein |
| 1026 | CP024750.1 | AZN66902.1 | open | 1038 [NA] | 345 [AA] | 1093435-1094472 | TPECDC1_1003 | putative membrane protein |
| 1027 | CP024750.1 | AZN66903.1 | open | 606 [NA] | 201 [AA] | 1094495-1095100 | TPECDC1_1004 | recombination protein R |
| 1028 | CP024750.1 | AZN66904.1 | open | 1719 [NA] | 572 [AA] | 1095174-1096892 | TPECDC1_1005 | DNA-directed DNA polymerase III gamma and tau subunits |
| 1029 | CP024750.1 | AZN66905.1 | open | 1914 [NA] | 637 [AA] | 1096951-1098864 | TPECDC1_1006 | DNA topoisomerase (ATP-hydrolyzing) subunit B |
| 1030 | CP024750.1 | AZN66906.1 | open | 918 [NA] | 305 [AA] | 1098973-1099890 | TPECDC1_1007 | thymidylate synthase (FAD) |
| 1031 | CP024750.1 | AZN66907.1 | open | 2538 [NA] | 845 [AA] | 1099933-1102470 | TPECDC1_1008 | ribonucleotide-diphosphate reductase subunit alpha |
| 1032 | CP024750.1 | AZN66908.1 | open | 1071 [NA] | 356 [AA] | 1102597-1103667 | TPECDC1_1009 | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) |
| 1033 | CP024750.1 | AZN66909.1 | open | 450 [NA] | 149 [AA] | 1103764-1104213 | TPECDC1_1010 | nucleoside-diphosphate kinase |
| 1034 | CP024750.1 | AZN66910.1 | open | 609 [NA] | 202 [AA] | 1104339-1104947 | TPECDC1_1011 | aminoacyl-tRNA hydrolase |
| 1035 | CP024750.1 | AZN66911.1 | open | 936 [NA] | 311 [AA] | 1104982-1105917 | TPECDC1_1012 | DNA-directed RNA polymerase sigma subunit RpoD |
| 1036 | CP024750.1 | AZN66912.1 | open | 267 [NA] | 88 [AA] | 1106122-1106388 | TPECDC1_1013 | chaperone GroES |
| 1037 | CP024750.1 | AZN66913.1 | open | 1917 [NA] | 638 [AA] | 1106399-1108315 | TPECDC1_1014 | hypothetical protein |
| 1038 | CP024750.1 | AZN66914.1 | open | 426 [NA] | 141 [AA] | 1108299-1108724 | TPECDC1_1015 | transcription antitermination protein NusB |
| 1039 | CP024750.1 | AZN66915.1 | open | 1086 [NA] | 361 [AA] | 1108721-1109806 | TPECDC1_1016 | putative peptidylprolyl isomerase |
| 1040 | CP024750.1 | AZN66916.1 | open | 1818 [NA] | 605 [AA] | 1109879-1111696 | TPECDC1_1017 | alanine--tRNA ligase |
| 1041 | CP024750.1 | AZN66917.1 | open | 192 [NA] | 63 [AA] | 1111741-1111932 | TPECDC1_1017a | hypothetical protein |
| 1042 | CP024750.1 | AZN66918.1 | open | 1515 [NA] | 504 [AA] | 1111868-1113382 | TPECDC1_1018 | hypothetical protein |
| 1043 | CP024750.1 | AZN66919.1 | open | 444 [NA] | 147 [AA] | 1113404-1113847 | TPECDC1_1019 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C |
| 1044 | CP024750.1 | AZN66920.1 | open | 1521 [NA] | 506 [AA] | 1113848-1115368 | TPECDC1_1020 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A |
| 1045 | CP024750.1 | AZN66921.1 | open | 1530 [NA] | 509 [AA] | 1115361-1116890 | TPECDC1_1021 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B |
| 1046 | CP024750.1 | AZN66922.1 | open | 1368 [NA] | 455 [AA] | 1116986-1118353 | TPECDC1_1022 | DNA repair protein Sms |
| 1047 | CP024750.1 | AZN66923.1 | open | 669 [NA] | 222 [AA] | 1118400-1119068 | TPECDC1_1023 | recombination regulator RecX |
| 1048 | CP024750.1 | AZN66924.1 | open | 390 [NA] | 129 [AA] | 1119022-1119411 | TPECDC1_1024 | ribosomal protein S9 |
| 1049 | CP024750.1 | AZN66925.1 | open | 429 [NA] | 142 [AA] | 1119427-1119855 | TPECDC1_1025 | ribosomal protein L13 |
| 1050 | CP024750.1 | AZN66926.1 | open | 423 [NA] | 140 [AA] | 1119808-1120230 | TPECDC1_1025a | hypothetical protein |
| 1051 | CP024750.1 | AZN66927.1 | open | 1770 [NA] | 589 [AA] | 1120288-1122057 | TPECDC1_1026 | putative oligoendopeptidase F |
| 1052 | CP024750.1 | AZN66928.1 | open | 777 [NA] | 258 [AA] | 1122180-1122956 | TPECDC1_1027 | uridine phosphorylase |
| 1053 | CP024750.1 | AZN66929.1 | open | 2013 [NA] | 670 [AA] | 1122972-1124984 | TPECDC1_1028 | excision endonuclease subunit UvrD |
| 1054 | CP024750.1 | AZN66930.1 | open | 687 [NA] | 228 [AA] | 1125067-1125753 | TPECDC1_1029 | hypothetical protein |
| 1055 | CP024750.1 | AZN66931.1 | open | 435 [NA] | 144 [AA] | 1127533-1127967 | TPECDC1_1032 | hypothetical protein |
| 1056 | CP024750.1 | AZN66932.1 | open | 936 [NA] | 311 [AA] | 1127979-1128914 | TPECDC1_1033 | patatin family phospholipase |
| 1057 | CP024750.1 | AZN66933.1 | open | 1026 [NA] | 341 [AA] | 1128988-1130013 | TPECDC1_1034 | CaCA family calcium (Ca2+):cation antiporter |
| 1058 | CP024750.1 | AZN66934.1 | open | 2871 [NA] | 956 [AA] | 1130010-1132880 | TPECDC1_1035 | valine--tRNA ligase |
| 1059 | CP024750.1 | AZN66935.1 | open | 2379 [NA] | 792 [AA] | 1133033-1135411 | TPECDC1_1036 | P-ATPase superfamily P-type ATPase transporter |
| 1060 | CP024750.1 | AZN66936.1 | open | 717 [NA] | 238 [AA] | 1135501-1136217 | TPECDC1_1037 | putative hemolysin III |
| 1061 | CP024750.1 | AZN66937.1 | open | 534 [NA] | 177 [AA] | 1136376-1136909 | TPECDC1_1038 | bacterioferrin |
| 1062 | CP024750.1 | AZN66938.1 | open | 573 [NA] | 190 [AA] | 1137136-1137708 | TPECDC1_1039 | adenine phosphoribosyltransferase |
| 1063 | CP024750.1 | AZN66939.1 | open | 1056 [NA] | 351 [AA] | 1137731-1138786 | TPECDC1_1040 | lysine--tRNA ligase |
| 1064 | CP024750.1 | AZN66940.1 | open | 600 [NA] | 199 [AA] | 1138786-1139385 | TPECDC1_1041 | S14 family endopeptidase ClpP |