Genome Explorer: Agrobacterium tumefaciens 17-1474-1e (SEQF8769.1)
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Agrobacterium tumefaciens 17-1474-1e (SEQF8769.1)
NCBI Annotation for SEQF8769.1
| Genome selected: Agrobacterium tumefaciens 17-1474-1e | |||
| Contigs: | 36 | Bases: | 6003720 bps |
| CDS: | 108 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 50 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5501 | JAAMBQ010000036.1 | NTD67137.1 | open | 693 [NA] | 230 [AA] | 92732-93424 | G6M32_28270 | DUF72 domain-containing protein |
| 5502 | JAAMBQ010000036.1 | NTD67138.1 | open | 336 [NA] | 111 [AA] | 93628-93963 | G6M32_28275 | helix-turn-helix domain-containing protein |
| 5503 | JAAMBQ010000036.1 | NTD67139.1 | open | 1248 [NA] | 415 [AA] | 93956-95203 | G6M32_28280 | type II toxin-antitoxin system HipA family toxin |
| 5504 | JAAMBQ010000036.1 | NTD67140.1 | open | 1101 [NA] | 366 [AA] | 96549-97649 | G6M32_28290 | hypothetical protein |
| 5505 | JAAMBQ010000036.1 | NTD67141.1 | open | 249 [NA] | 82 [AA] | 97627-97875 | G6M32_28295 | hypothetical protein |
| 5506 | JAAMBQ010000036.1 | NTD67142.1 | open | 1809 [NA] | 602 [AA] | 97878-99686 | G6M32_28300 | DUF2326 domain-containing protein |
| 5507 | JAAMBQ010000036.1 | NTD67143.1 | open | 492 [NA] | 163 [AA] | 99880-100371 | G6M32_28305 | DUF4231 domain-containing protein |
| 5508 | JAAMBQ010000036.1 | NTD67144.1 | open | 1212 [NA] | 403 [AA] | 100574-101785 | G6M32_28310 | hypothetical protein |
| 5509 | JAAMBQ010000036.1 | NTD67145.1 | open | 477 [NA] | 158 [AA] | 101788-102264 | G6M32_28315 | response regulator |
| 5510 | JAAMBQ010000036.1 | NTD67146.1 | open | 3468 [NA] | 1155 [AA] | 102257-105724 | G6M32_28320 | hypothetical protein |
| 5511 | JAAMBQ010000036.1 | NTD67147.1 | open | 1431 [NA] | 476 [AA] | 105996-107426 | G6M32_28325 | hypothetical protein |
| 5512 | JAAMBQ010000036.1 | NTD67148.1 | open | 879 [NA] | 292 [AA] | 111513-112391 | G6M32_28350 | hypothetical protein |
| 5513 | JAAMBQ010000036.1 | NTD67149.1 | open | 459 [NA] | 152 [AA] | 112388-112846 | G6M32_28355 | hypothetical protein |
| 5514 | JAAMBQ010000036.1 | NTD67150.1 | open | 336 [NA] | 111 [AA] | 112865-113200 | G6M32_28360 | hypothetical protein |
| 5515 | JAAMBQ010000036.1 | NTD67151.1 | open | 345 [NA] | 114 [AA] | 113827-114171 | G6M32_28365 | hypothetical protein |
| 5516 | JAAMBQ010000036.1 | NTD67152.1 | open | 1866 [NA] | 621 [AA] | 114161-116026 | G6M32_28370 | hypothetical protein |
| 5517 | JAAMBQ010000036.1 | NTD67153.1 | open | 1269 [NA] | 422 [AA] | 116392-117660 | G6M32_28375 | cytochrome P450 |
| 5518 | JAAMBQ010000036.1 | NTD67154.1 | open | 1176 [NA] | 391 [AA] | 117729-118904 | G6M32_28380 | cytochrome P450 |
| 5519 | JAAMBQ010000036.1 | NTD67155.1 | open | 438 [NA] | 145 [AA] | 119141-119578 | G6M32_28385 | hypothetical protein |
| 5520 | JAAMBQ010000036.1 | NTD67156.1 | open | 138 [NA] | 45 [AA] | 119930-120067 | G6M32_28390 | transposase |
| 5521 | JAAMBQ010000036.1 | NTD67157.1 | open | 744 [NA] | 247 [AA] | 120334-121077 | G6M32_28395 | sulfite exporter TauE/SafE family protein |
| 5522 | JAAMBQ010000036.1 | NTD67158.1 | open | 1557 [NA] | 518 [AA] | 121096-122652 | G6M32_28400 | IS66 family transposase |
| 5523 | JAAMBQ010000036.1 | NTD67159.1 | open | 354 [NA] | 117 [AA] | 122722-123075 | G6M32_28405 | IS66 family insertion sequence element accessory protein TnpB |
| 5524 | JAAMBQ010000036.1 | NTD67160.1 | open | 390 [NA] | 129 [AA] | 123072-123461 | G6M32_28410 | IS66 family insertion sequence hypothetical protein |
| 5525 | JAAMBQ010000036.1 | NTD67161.1 | open | 2490 [NA] | 829 [AA] | 124270-126759 | G6M32_28415 | two-component system VirA-like sensor kinase |
| 5526 | JAAMBQ010000036.1 | NTD67162.1 | open | 744 [NA] | 247 [AA] | 127579-128322 | G6M32_28420 | hypothetical protein |
| 5527 | JAAMBQ010000036.1 | NTD67163.1 | open | 720 [NA] | 239 [AA] | 129799-130518 | G6M32_28430 | type IV secretion system lytic transglycosylase VirB1 |
| 5528 | JAAMBQ010000036.1 | NTD67164.1 | open | 366 [NA] | 121 [AA] | 130533-130898 | G6M32_28435 | pilin major subunit VirB2 |
| 5529 | JAAMBQ010000036.1 | NTD67165.1 | open | 327 [NA] | 108 [AA] | 130898-131224 | G6M32_28440 | type IV secretion system protein VirB3 |
| 5530 | JAAMBQ010000036.1 | NTD67166.1 | open | 2370 [NA] | 789 [AA] | 131224-133593 | G6M32_28445 | VirB4 family type IV secretion/conjugal transfer ATPase |
| 5531 | JAAMBQ010000036.1 | NTD67167.1 | open | 663 [NA] | 220 [AA] | 133608-134270 | G6M32_28450 | pilin minor subunit VirB5 |
| 5532 | JAAMBQ010000036.1 | NTD67168.1 | open | 888 [NA] | 295 [AA] | 134367-135254 | G6M32_28455 | type IV secretion system protein |
| 5533 | JAAMBQ010000036.1 | NTD67169.1 | open | 168 [NA] | 55 [AA] | 135288-135455 | G6M32_28460 | type IV secretion system lipoprotein VirB7 |
| 5534 | JAAMBQ010000036.1 | NTD67170.1 | open | 714 [NA] | 237 [AA] | 135442-136155 | G6M32_28465 | type IV secretion system protein VirB8 |
| 5535 | JAAMBQ010000036.1 | NTD67171.1 | open | 882 [NA] | 293 [AA] | 136152-137033 | G6M32_28470 | P-type conjugative transfer protein VirB9 |
| 5536 | JAAMBQ010000036.1 | NTD67172.1 | open | 1134 [NA] | 377 [AA] | 137030-138163 | G6M32_28475 | TrbI/VirB10 family protein |
| 5537 | JAAMBQ010000036.1 | NTD67173.1 | open | 1032 [NA] | 343 [AA] | 138203-139234 | G6M32_28480 | P-type DNA transfer ATPase VirB11 |
| 5538 | JAAMBQ010000036.1 | NTD67174.1 | open | 726 [NA] | 241 [AA] | 139444-140169 | G6M32_28485 | response regulator |
| 5539 | JAAMBQ010000036.1 | NTD67175.1 | open | 609 [NA] | 202 [AA] | 140280-140888 | G6M32_28490 | conjugal transfer protein VirC2 |
| 5540 | JAAMBQ010000036.1 | NTD67176.1 | open | 696 [NA] | 231 [AA] | 140891-141586 | G6M32_28495 | conjugal transfer ATPase VirC1 |
| 5541 | JAAMBQ010000036.1 | NTD67177.1 | open | 444 [NA] | 147 [AA] | 141855-142298 | G6M32_28500 | T-DNA border endonuclease subunit VirD1 |
| 5542 | JAAMBQ010000036.1 | NTD67178.1 | open | 1296 [NA] | 431 [AA] | 142332-143627 | G6M32_28505 | T-DNA border endonuclease VirD2 |
| 5543 | JAAMBQ010000036.1 | NTD67179.1 | open | 1959 [NA] | 652 [AA] | 144262-146220 | G6M32_28510 | type IV secretion system ATPase VirD4 |
| 5544 | JAAMBQ010000036.1 | NTD67180.1 | open | 2511 [NA] | 836 [AA] | 146321-148831 | G6M32_28515 | virA/G regulated protein |
| 5545 | JAAMBQ010000036.1 | NTD67181.1 | open | 198 [NA] | 65 [AA] | 149281-149478 | G6M32_28520 | type IV secretion system effector chaperone VirE1 |
| 5546 | JAAMBQ010000036.1 | NTD67182.1 | open | 1650 [NA] | 549 [AA] | 149483-151132 | G6M32_28525 | type IV secretion system single-stranded DNA binding effector VirE2 |
| 5547 | JAAMBQ010000036.1 | NTD67183.1 | open | 2019 [NA] | 672 [AA] | 151199-153217 | G6M32_28530 | virA/G regulated protein |
| 5548 | JAAMBQ010000036.1 | NTD67184.1 | open | 417 [NA] | 138 [AA] | 153629-154045 | G6M32_28540 | hypothetical protein |
| 5549 | JAAMBQ010000036.1 | NTD67185.1 | open | 246 [NA] | 81 [AA] | 154085-154330 | G6M32_28545 | hypothetical protein |
| 5550 | JAAMBQ010000036.1 | NTD67186.1 | open | 303 [NA] | 100 [AA] | 156310-156612 | G6M32_28560 | integration host factor subunit beta |
| 5551 | JAAMBQ010000036.1 | NTD67187.1 | open | 303 [NA] | 100 [AA] | 157059-157361 | G6M32_28570 | cold shock domain-containing protein |
| 5552 | JAAMBQ010000036.1 | NTD67188.1 | open | 648 [NA] | 215 [AA] | 158379-159026 | G6M32_28580 | hypothetical protein |
| 5553 | JAAMBQ010000036.1 | NTD67189.1 | open | 495 [NA] | 164 [AA] | 159823-160317 | G6M32_28590 | GNAT family N-acetyltransferase |
| 5554 | JAAMBQ010000036.1 | NTD67190.1 | open | 1764 [NA] | 587 [AA] | 160693-162456 | G6M32_28595 | ParB/RepB/Spo0J family partition protein |
| 5555 | JAAMBQ010000036.1 | NTD67191.1 | open | 474 [NA] | 157 [AA] | 162555-163028 | G6M32_28600 | hypothetical protein |
| 5556 | JAAMBQ010000036.1 | NTD67192.1 | open | 888 [NA] | 295 [AA] | 163025-163912 | G6M32_28605 | hypothetical protein |
| 5557 | JAAMBQ010000036.1 | NTD67193.1 | open | 366 [NA] | 121 [AA] | 163909-164274 | G6M32_28610 | hypothetical protein |
| 5558 | JAAMBQ010000036.1 | NTD67194.1 | open | 600 [NA] | 199 [AA] | 164661-165260 | G6M32_28615 | hypothetical protein |
| 5559 | JAAMBQ010000036.1 | NTD67195.1 | open | 450 [NA] | 149 [AA] | 165372-165821 | G6M32_28620 | hypothetical protein |
| 5560 | JAAMBQ010000036.1 | NTD67196.1 | open | 420 [NA] | 139 [AA] | 165936-166355 | G6M32_28625 | helix-turn-helix domain-containing protein |
| 5561 | JAAMBQ010000036.1 | NTD67197.1 | open | 933 [NA] | 310 [AA] | 166540-167472 | G6M32_28630 | ArdC family protein |
| 5562 | JAAMBQ010000036.1 | NTD67198.1 | open | 717 [NA] | 238 [AA] | 167620-168336 | G6M32_28635 | hypothetical protein |
| 5563 | JAAMBQ010000036.1 | NTD67199.1 | open | 624 [NA] | 207 [AA] | 168308-168931 | G6M32_28640 | RES family NAD+ phosphorylase |