Genome Explorer: Delftia acidovorans SPH-1 (SEQF1413.1)
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PROKKA Annotation for SEQF1413.1
| Genome selected: Delftia acidovorans SPH-1 | |||
| Contigs: | 1 | Bases: | 6767514 bps |
| CDS: | 6115 | rRNA: | 15 |
| tmRNA: | 1 | tRNA: | 83 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 6001 | SEQF1413.1_CP000884.1 | SEQF1413.1_06185 | open | 1653 [NA] | 550 [AA] | 6628230-6629882 | betA | Oxygen-dependent choline dehydrogenase |
| 6002 | SEQF1413.1_CP000884.1 | SEQF1413.1_06186 | open | 1329 [NA] | 442 [AA] | 6629931-6631259 | abaF | Fosfomycin resistance protein AbaF |
| 6003 | SEQF1413.1_CP000884.1 | SEQF1413.1_06187 | open | 861 [NA] | 286 [AA] | 6631440-6632300 | hypothetical protein | |
| 6004 | SEQF1413.1_CP000884.1 | SEQF1413.1_06188 | open | 966 [NA] | 321 [AA] | 6632323-6633288 | dmlR_33 | HTH-type transcriptional regulator DmlR |
| 6005 | SEQF1413.1_CP000884.1 | SEQF1413.1_06189 | open | 1179 [NA] | 392 [AA] | 6633418-6634596 | ydhP | Inner membrane transport protein YdhP |
| 6006 | SEQF1413.1_CP000884.1 | SEQF1413.1_06190 | open | 5955 [NA] | 1984 [AA] | 6634600-6640554 | uvrA_2 | UvrABC system protein A |
| 6007 | SEQF1413.1_CP000884.1 | SEQF1413.1_06191 | open | 120 [NA] | 39 [AA] | 6640733-6640852 | hypothetical protein | |
| 6008 | SEQF1413.1_CP000884.1 | SEQF1413.1_06192 | open | 984 [NA] | 327 [AA] | 6640990-6641973 | Outer membrane porin protein 32 | |
| 6009 | SEQF1413.1_CP000884.1 | SEQF1413.1_06193 | open | 1683 [NA] | 560 [AA] | 6642379-6644061 | nanT | Sialic acid transporter NanT |
| 6010 | SEQF1413.1_CP000884.1 | SEQF1413.1_06194 | open | 309 [NA] | 102 [AA] | 6644365-6644673 | yjcH | Inner membrane protein YjcH |
| 6011 | SEQF1413.1_CP000884.1 | SEQF1413.1_06195 | open | 1734 [NA] | 577 [AA] | 6644670-6646403 | actP_3 | Cationacetate symporter ActP |
| 6012 | SEQF1413.1_CP000884.1 | SEQF1413.1_06196 | open | 636 [NA] | 211 [AA] | 6646621-6647256 | hypothetical protein | |
| 6013 | SEQF1413.1_CP000884.1 | SEQF1413.1_06197 | open | 654 [NA] | 217 [AA] | 6647278-6647931 | dinG_4 | 3-5 exonuclease DinG |
| 6014 | SEQF1413.1_CP000884.1 | SEQF1413.1_06198 | open | 1854 [NA] | 617 [AA] | 6647928-6649781 | hypothetical protein | |
| 6015 | SEQF1413.1_CP000884.1 | SEQF1413.1_06199 | open | 636 [NA] | 211 [AA] | 6649782-6650417 | nsaD_2 | 2-hydroxychromene-2-carboxylate isomerase |
| 6016 | SEQF1413.1_CP000884.1 | SEQF1413.1_06200 | open | 246 [NA] | 81 [AA] | 6650441-6650686 | hypothetical protein | |
| 6017 | SEQF1413.1_CP000884.1 | SEQF1413.1_06201 | open | 504 [NA] | 167 [AA] | 6650683-6651186 | hypothetical protein | |
| 6018 | SEQF1413.1_CP000884.1 | SEQF1413.1_06202 | open | 942 [NA] | 313 [AA] | 6651189-6652130 | liuE | 3-hydroxy-3-isohexenylglutaryl-CoAhydroxy-methylglutaryl-CoA lyase |
| 6019 | SEQF1413.1_CP000884.1 | SEQF1413.1_06203 | open | 909 [NA] | 302 [AA] | 6652240-6653148 | gltC_11 | HTH-type transcriptional regulator GltC |
| 6020 | SEQF1413.1_CP000884.1 | SEQF1413.1_06204 | open | 963 [NA] | 320 [AA] | 6653240-6654202 | paaH_2 | 3-hydroxyadipyl-CoA dehydrogenase |
| 6021 | SEQF1413.1_CP000884.1 | SEQF1413.1_06205 | open | 855 [NA] | 284 [AA] | 6654199-6655053 | kce_4 | 3-keto-5-aminohexanoate cleavage enzyme |
| 6022 | SEQF1413.1_CP000884.1 | SEQF1413.1_06206 | open | 1035 [NA] | 344 [AA] | 6655162-6656196 | hypothetical protein | |
| 6023 | SEQF1413.1_CP000884.1 | SEQF1413.1_06207 | open | 921 [NA] | 306 [AA] | 6656206-6657126 | ghrA_3 | Glyoxylatehydroxypyruvate reductase A |
| 6024 | SEQF1413.1_CP000884.1 | SEQF1413.1_06208 | open | 2019 [NA] | 672 [AA] | 6657197-6659215 | accA1_2 | Acetyl-propionyl-coenzyme A carboxylase alpha chain |
| 6025 | SEQF1413.1_CP000884.1 | SEQF1413.1_06209 | open | 750 [NA] | 249 [AA] | 6659267-6660016 | hypothetical protein | |
| 6026 | SEQF1413.1_CP000884.1 | SEQF1413.1_06210 | open | 786 [NA] | 261 [AA] | 6660083-6660868 | dpgD_2 | Enoyl-CoA-hydratase |
| 6027 | SEQF1413.1_CP000884.1 | SEQF1413.1_06211 | open | 1608 [NA] | 535 [AA] | 6660903-6662510 | Methylmalonyl-CoA carboxyltransferase 12S subunit | |
| 6028 | SEQF1413.1_CP000884.1 | SEQF1413.1_06212 | open | 1734 [NA] | 577 [AA] | 6662603-6664336 | hypothetical protein | |
| 6029 | SEQF1413.1_CP000884.1 | SEQF1413.1_06213 | open | 1719 [NA] | 572 [AA] | 6664381-6666099 | fadD3_3 | 3-[(3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase |
| 6030 | SEQF1413.1_CP000884.1 | SEQF1413.1_06214 | open | 1077 [NA] | 358 [AA] | 6666236-6667312 | putative HTH-type transcriptional regulator | |
| 6031 | SEQF1413.1_CP000884.1 | SEQF1413.1_06215 | open | 666 [NA] | 221 [AA] | 6667388-6668053 | hypothetical protein | |
| 6032 | SEQF1413.1_CP000884.1 | SEQF1413.1_06216 | open | 693 [NA] | 230 [AA] | 6668091-6668783 | yieH | 6-phosphogluconate phosphatase |
| 6033 | SEQF1413.1_CP000884.1 | SEQF1413.1_06217 | open | 1053 [NA] | 350 [AA] | 6668883-6669935 | hypothetical protein | |
| 6034 | SEQF1413.1_CP000884.1 | SEQF1413.1_06218 | open | 738 [NA] | 245 [AA] | 6670123-6670860 | vraR | Response regulator protein VraR |
| 6035 | SEQF1413.1_CP000884.1 | SEQF1413.1_06219 | open | 1860 [NA] | 619 [AA] | 6670830-6672689 | rcsC_20 | Sensor histidine kinase RcsC |
| 6036 | SEQF1413.1_CP000884.1 | SEQF1413.1_06220 | open | 414 [NA] | 137 [AA] | 6672673-6673086 | hypothetical protein | |
| 6037 | SEQF1413.1_CP000884.1 | SEQF1413.1_06221 | open | 498 [NA] | 165 [AA] | 6673253-6673750 | hypothetical protein | |
| 6038 | SEQF1413.1_CP000884.1 | SEQF1413.1_06222 | open | 792 [NA] | 263 [AA] | 6673772-6674563 | 2-(acetamidomethylene)succinate hydrolase | |
| 6039 | SEQF1413.1_CP000884.1 | SEQF1413.1_06223 | open | 1131 [NA] | 376 [AA] | 6674706-6675836 | acdA_2 | Acyl-CoA dehydrogenase |
| 6040 | SEQF1413.1_CP000884.1 | SEQF1413.1_06224 | open | 663 [NA] | 220 [AA] | 6675903-6676565 | hypothetical protein | |
| 6041 | SEQF1413.1_CP000884.1 | SEQF1413.1_06225 | open | 624 [NA] | 207 [AA] | 6676594-6677217 | hypothetical protein | |
| 6042 | SEQF1413.1_CP000884.1 | SEQF1413.1_06226 | open | 1182 [NA] | 393 [AA] | 6677270-6678451 | thlA | Acetyl-CoA acetyltransferase |
| 6043 | SEQF1413.1_CP000884.1 | SEQF1413.1_06227 | open | 1788 [NA] | 595 [AA] | 6678498-6680285 | aceK | Isocitrate dehydrogenase kinasephosphatase |
| 6044 | SEQF1413.1_CP000884.1 | SEQF1413.1_06228 | open | 663 [NA] | 220 [AA] | 6680319-6680981 | can | Carbonic anhydrase 2 |
| 6045 | SEQF1413.1_CP000884.1 | SEQF1413.1_06229 | open | 1188 [NA] | 395 [AA] | 6681038-6682225 | mmgC_5 | Acyl-CoA dehydrogenase |
| 6046 | SEQF1413.1_CP000884.1 | SEQF1413.1_06230 | open | 459 [NA] | 152 [AA] | 6682269-6682727 | hypothetical protein | |
| 6047 | SEQF1413.1_CP000884.1 | SEQF1413.1_06231 | open | 402 [NA] | 133 [AA] | 6682764-6683165 | hypothetical protein | |
| 6048 | SEQF1413.1_CP000884.1 | SEQF1413.1_06242 | open | 951 [NA] | 316 [AA] | 6694867-6695817 | gshB | Glutathione synthetase |
| 6049 | SEQF1413.1_CP000884.1 | SEQF1413.1_06243 | open | 1182 [NA] | 393 [AA] | 6695898-6697079 | ydcO_2 | Inner membrane protein YdcO |
| 6050 | SEQF1413.1_CP000884.1 | SEQF1413.1_06244 | open | 1884 [NA] | 627 [AA] | 6697130-6699013 | kup_2 | Low affinity potassium transport system protein kup |
| 6051 | SEQF1413.1_CP000884.1 | SEQF1413.1_06245 | open | 1296 [NA] | 431 [AA] | 6699096-6700391 | hypothetical protein | |
| 6052 | SEQF1413.1_CP000884.1 | SEQF1413.1_06246 | open | 1467 [NA] | 488 [AA] | 6700473-6701939 | trkH | Trk system potassium uptake protein TrkH |
| 6053 | SEQF1413.1_CP000884.1 | SEQF1413.1_06247 | open | 1458 [NA] | 485 [AA] | 6701950-6703407 | trkA | Trk system potassium uptake protein TrkA |
| 6054 | SEQF1413.1_CP000884.1 | SEQF1413.1_06248 | open | 1281 [NA] | 426 [AA] | 6703497-6704777 | proA_2 | Gamma-glutamyl phosphate reductase |
| 6055 | SEQF1413.1_CP000884.1 | SEQF1413.1_06249 | open | 303 [NA] | 100 [AA] | 6704966-6705268 | hypothetical protein | |
| 6056 | SEQF1413.1_CP000884.1 | SEQF1413.1_06250 | open | 1053 [NA] | 350 [AA] | 6705279-6706331 | holA | DNA polymerase III subunit delta |
| 6057 | SEQF1413.1_CP000884.1 | SEQF1413.1_06251 | open | 507 [NA] | 168 [AA] | 6706337-6706843 | lptE | LPS-assembly lipoprotein LptE |
| 6058 | SEQF1413.1_CP000884.1 | SEQF1413.1_06252 | open | 2736 [NA] | 911 [AA] | 6706888-6709623 | leuS | Leucine--tRNA ligase |
| 6059 | SEQF1413.1_CP000884.1 | SEQF1413.1_06253 | open | 1215 [NA] | 404 [AA] | 6709986-6711200 | ybdG | Miniconductance mechanosensitive channel YbdG |
| 6060 | SEQF1413.1_CP000884.1 | SEQF1413.1_06254 | open | 480 [NA] | 159 [AA] | 6711228-6711707 | tolR | Tol-Pal system protein TolR |
| 6061 | SEQF1413.1_CP000884.1 | SEQF1413.1_06255 | open | 735 [NA] | 244 [AA] | 6711732-6712466 | tolQ_4 | Tol-Pal system protein TolQ |
| 6062 | SEQF1413.1_CP000884.1 | SEQF1413.1_06256 | open | 837 [NA] | 278 [AA] | 6712531-6713367 | dapB | 4-hydroxy-tetrahydrodipicolinate reductase |
| 6063 | SEQF1413.1_CP000884.1 | SEQF1413.1_06257 | open | 510 [NA] | 169 [AA] | 6713492-6714001 | bamE | Outer membrane protein assembly factor BamE |
| 6064 | SEQF1413.1_CP000884.1 | SEQF1413.1_06258 | open | 468 [NA] | 155 [AA] | 6714156-6714623 | fur_2 | Ferric uptake regulation protein |
| 6065 | SEQF1413.1_CP000884.1 | SEQF1413.1_06259 | open | 1578 [NA] | 525 [AA] | 6714767-6716344 | hypothetical protein | |
| 6066 | SEQF1413.1_CP000884.1 | SEQF1413.1_06260 | open | 1215 [NA] | 404 [AA] | 6716362-6717576 | hypothetical protein | |
| 6067 | SEQF1413.1_CP000884.1 | SEQF1413.1_06261 | open | 942 [NA] | 313 [AA] | 6717585-6718526 | sigJ | ECF RNA polymerase sigma factor SigJ |
| 6068 | SEQF1413.1_CP000884.1 | SEQF1413.1_06262 | open | 492 [NA] | 163 [AA] | 6718597-6719088 | nudJ | Phosphatase NudJ |
| 6069 | SEQF1413.1_CP000884.1 | SEQF1413.1_06263 | open | 525 [NA] | 174 [AA] | 6719186-6719710 | hypothetical protein | |
| 6070 | SEQF1413.1_CP000884.1 | SEQF1413.1_06264 | open | 1002 [NA] | 333 [AA] | 6719805-6720806 | putative cyclic di-GMP phosphodiesterase | |
| 6071 | SEQF1413.1_CP000884.1 | SEQF1413.1_06265 | open | 597 [NA] | 198 [AA] | 6720803-6721399 | hypothetical protein | |
| 6072 | SEQF1413.1_CP000884.1 | SEQF1413.1_06266 | open | 3135 [NA] | 1044 [AA] | 6721439-6724573 | rcsC_21 | Sensor histidine kinase RcsC |
| 6073 | SEQF1413.1_CP000884.1 | SEQF1413.1_06267 | open | 258 [NA] | 85 [AA] | 6724724-6724981 | hypothetical protein | |
| 6074 | SEQF1413.1_CP000884.1 | SEQF1413.1_06268 | open | 105 [NA] | 34 [AA] | 6725001-6725105 | hypothetical protein | |
| 6075 | SEQF1413.1_CP000884.1 | SEQF1413.1_06269 | open | 969 [NA] | 322 [AA] | 6725403-6726371 | hypothetical protein | |
| 6076 | SEQF1413.1_CP000884.1 | SEQF1413.1_06270 | open | 1359 [NA] | 452 [AA] | 6726617-6727975 | bauA | Beta-alanine--pyruvate aminotransferase |
| 6077 | SEQF1413.1_CP000884.1 | SEQF1413.1_06271 | open | 1017 [NA] | 338 [AA] | 6728055-6729071 | hypothetical protein | |
| 6078 | SEQF1413.1_CP000884.1 | SEQF1413.1_06272 | open | 1017 [NA] | 338 [AA] | 6729184-6730200 | nanR_3 | HTH-type transcriptional repressor NanR |
| 6079 | SEQF1413.1_CP000884.1 | SEQF1413.1_06273 | open | 1206 [NA] | 401 [AA] | 6730445-6731650 | hypothetical protein | |
| 6080 | SEQF1413.1_CP000884.1 | SEQF1413.1_06274 | open | 861 [NA] | 286 [AA] | 6731847-6732707 | livH_14 | High-affinity branched-chain amino acid transport system permease protein LivH |
| 6081 | SEQF1413.1_CP000884.1 | SEQF1413.1_06275 | open | 993 [NA] | 330 [AA] | 6732713-6733705 | hypothetical protein | |
| 6082 | SEQF1413.1_CP000884.1 | SEQF1413.1_06276 | open | 780 [NA] | 259 [AA] | 6733702-6734481 | lptB_8 | Lipopolysaccharide export system ATP-binding protein LptB |
| 6083 | SEQF1413.1_CP000884.1 | SEQF1413.1_06277 | open | 711 [NA] | 236 [AA] | 6734478-6735188 | livF_15 | High-affinity branched-chain amino acid transport ATP-binding protein LivF |
| 6084 | SEQF1413.1_CP000884.1 | SEQF1413.1_06278 | open | 1296 [NA] | 431 [AA] | 6735221-6736516 | hyuC_2 | N-carbamoyl-L-amino-acid hydrolase |
| 6085 | SEQF1413.1_CP000884.1 | SEQF1413.1_06279 | open | 1467 [NA] | 488 [AA] | 6736513-6737979 | hypothetical protein | |
| 6086 | SEQF1413.1_CP000884.1 | SEQF1413.1_06280 | open | 2310 [NA] | 769 [AA] | 6738188-6740497 | maeB_2 | NADP-dependent malic enzyme |
| 6087 | SEQF1413.1_CP000884.1 | SEQF1413.1_06281 | open | 420 [NA] | 139 [AA] | 6740815-6741234 | hypothetical protein | |
| 6088 | SEQF1413.1_CP000884.1 | SEQF1413.1_06282 | open | 426 [NA] | 141 [AA] | 6741384-6741809 | hypothetical protein | |
| 6089 | SEQF1413.1_CP000884.1 | SEQF1413.1_06283 | open | 792 [NA] | 263 [AA] | 6741890-6742681 | rsmA | Ribosomal RNA small subunit methyltransferase A |
| 6090 | SEQF1413.1_CP000884.1 | SEQF1413.1_06284 | open | 1428 [NA] | 475 [AA] | 6742734-6744161 | surA_2 | Chaperone SurA |
| 6091 | SEQF1413.1_CP000884.1 | SEQF1413.1_06285 | open | 2325 [NA] | 774 [AA] | 6744203-6746527 | lptD | LPS-assembly protein LptD |
| 6092 | SEQF1413.1_CP000884.1 | SEQF1413.1_06286 | open | 1098 [NA] | 365 [AA] | 6746731-6747828 | amgK | N-acetylmuramateN-acetylglucosamine kinase |
| 6093 | SEQF1413.1_CP000884.1 | SEQF1413.1_06287 | open | 753 [NA] | 250 [AA] | 6747842-6748594 | rsmE | Ribosomal RNA small subunit methyltransferase E |
| 6094 | SEQF1413.1_CP000884.1 | SEQF1413.1_06288 | open | 885 [NA] | 294 [AA] | 6748581-6749465 | hypothetical protein | |
| 6095 | SEQF1413.1_CP000884.1 | SEQF1413.1_06289 | open | 1509 [NA] | 502 [AA] | 6749465-6750973 | hypothetical protein | |
| 6096 | SEQF1413.1_CP000884.1 | SEQF1413.1_06290 | open | 498 [NA] | 165 [AA] | 6750985-6751482 | hypothetical protein | |
| 6097 | SEQF1413.1_CP000884.1 | SEQF1413.1_06291 | open | 651 [NA] | 216 [AA] | 6751535-6752185 | hypothetical protein | |
| 6098 | SEQF1413.1_CP000884.1 | SEQF1413.1_06292 | open | 1164 [NA] | 387 [AA] | 6752169-6753332 | glpQ_2 | Glycerophosphodiester phosphodiesterase |
| 6099 | SEQF1413.1_CP000884.1 | SEQF1413.1_06293 | open | 585 [NA] | 194 [AA] | 6753405-6753989 | metXA | Bifunctional methionine biosynthesis protein MetXAMetW |
| 6100 | SEQF1413.1_CP000884.1 | SEQF1413.1_06294 | open | 1122 [NA] | 373 [AA] | 6753986-6755107 | metXS | Homoserine O-succinyltransferase |
| 6101 | SEQF1413.1_CP000884.1 | SEQF1413.1_06295 | open | 615 [NA] | 204 [AA] | 6755241-6755855 | mneA | Putative manganese exporter |
| 6102 | SEQF1413.1_CP000884.1 | SEQF1413.1_06296 | open | 375 [NA] | 124 [AA] | 6756313-6756687 | hypothetical protein | |
| 6103 | SEQF1413.1_CP000884.1 | SEQF1413.1_06297 | open | 531 [NA] | 176 [AA] | 6756943-6757473 | hypothetical protein | |
| 6104 | SEQF1413.1_CP000884.1 | SEQF1413.1_06298 | open | 801 [NA] | 266 [AA] | 6757578-6758378 | putative oxidoreductase | |
| 6105 | SEQF1413.1_CP000884.1 | SEQF1413.1_06299 | open | 618 [NA] | 205 [AA] | 6758421-6759038 | lptC | Lipopolysaccharide export system protein LptC |
| 6106 | SEQF1413.1_CP000884.1 | SEQF1413.1_06300 | open | 561 [NA] | 186 [AA] | 6759035-6759595 | kdsC | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC |
| 6107 | SEQF1413.1_CP000884.1 | SEQF1413.1_06301 | open | 1002 [NA] | 333 [AA] | 6759595-6760596 | kdsD | Arabinose 5-phosphate isomerase KdsD |
| 6108 | SEQF1413.1_CP000884.1 | SEQF1413.1_06302 | open | 558 [NA] | 185 [AA] | 6760694-6761251 | apt | Adenine phosphoribosyltransferase |
| 6109 | SEQF1413.1_CP000884.1 | SEQF1413.1_06303 | open | 753 [NA] | 250 [AA] | 6761269-6762021 | hypothetical protein | |
| 6110 | SEQF1413.1_CP000884.1 | SEQF1413.1_06304 | open | 480 [NA] | 159 [AA] | 6762198-6762677 | hypothetical protein | |
| 6111 | SEQF1413.1_CP000884.1 | SEQF1413.1_06305 | open | 1422 [NA] | 473 [AA] | 6762896-6764317 | mnmE | tRNA modification GTPase MnmE |
| 6112 | SEQF1413.1_CP000884.1 | SEQF1413.1_06306 | open | 1713 [NA] | 570 [AA] | 6764417-6766129 | yidC | Membrane protein insertase YidC |
| 6113 | SEQF1413.1_CP000884.1 | SEQF1413.1_06307 | open | 291 [NA] | 96 [AA] | 6766126-6766416 | yidD | Putative membrane protein insertion efficiency factor |
| 6114 | SEQF1413.1_CP000884.1 | SEQF1413.1_06308 | open | 471 [NA] | 156 [AA] | 6766413-6766883 | hypothetical protein | |
| 6115 | SEQF1413.1_CP000884.1 | SEQF1413.1_06309 | open | 135 [NA] | 44 [AA] | 6766981-6767115 | rpmH | 50S ribosomal protein L34 |