Genome Explorer: Limosilactobacillus oris F0423 (SEQF1856.2)
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PROKKA Annotation for SEQF1856.2
| Genome selected: Limosilactobacillus oris F0423 | |||
| Contigs: | 20 | Bases: | 2174937 bps |
| CDS: | 2051 | rRNA: | 17 |
| tmRNA: | 1 | tRNA: | 67 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00365 | open | 309 [NA] | 102 [AA] | 360310-360618 | rplX | 50S ribosomal protein L24 |
| 2002 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00366 | open | 369 [NA] | 122 [AA] | 360652-361020 | rplN | 50S ribosomal protein L14 |
| 2003 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00367 | open | 267 [NA] | 88 [AA] | 361085-361351 | rpsQ | 30S ribosomal protein S17 |
| 2004 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00368 | open | 207 [NA] | 68 [AA] | 361376-361582 | rpmC | 50S ribosomal protein L29 |
| 2005 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00369 | open | 435 [NA] | 144 [AA] | 361572-362006 | rplP | 50S ribosomal protein L16 |
| 2006 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00370 | open | 666 [NA] | 221 [AA] | 362010-362675 | rpsC | 30S ribosomal protein S3 |
| 2007 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00371 | open | 348 [NA] | 115 [AA] | 362688-363035 | rplV | 50S ribosomal protein L22 |
| 2008 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00372 | open | 279 [NA] | 92 [AA] | 363054-363332 | rpsS | 30S ribosomal protein S19 |
| 2009 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00373 | open | 846 [NA] | 281 [AA] | 363369-364214 | rplB | 50S ribosomal protein L2 |
| 2010 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00374 | open | 297 [NA] | 98 [AA] | 364240-364536 | rplW | 50S ribosomal protein L23 |
| 2011 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00375 | open | 624 [NA] | 207 [AA] | 364536-365159 | rplD | 50S ribosomal protein L4 |
| 2012 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00376 | open | 663 [NA] | 220 [AA] | 365181-365843 | rplC | 50S ribosomal protein L3 |
| 2013 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00377 | open | 309 [NA] | 102 [AA] | 365889-366197 | rpsJ | 30S ribosomal protein S10 |
| 2014 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00378 | open | 1326 [NA] | 441 [AA] | 366487-367812 | pucK_1 | Uric acid permease PucK |
| 2015 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00379 | open | 924 [NA] | 307 [AA] | 367947-368870 | IS30 family transposase IS1070 | |
| 2016 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00380 | open | 2085 [NA] | 694 [AA] | 369033-371117 | fus | Elongation factor G |
| 2017 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00381 | open | 471 [NA] | 156 [AA] | 371256-371726 | rpsG | 30S ribosomal protein S7 |
| 2018 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00382 | open | 417 [NA] | 138 [AA] | 371747-372163 | rpsL | 30S ribosomal protein S12 |
| 2019 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00383 | open | 687 [NA] | 228 [AA] | 372402-373088 | hypothetical protein | |
| 2020 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00384 | open | 1182 [NA] | 393 [AA] | 373134-374315 | hypothetical protein | |
| 2021 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00385 | open | 3636 [NA] | 1211 [AA] | 374498-378133 | rpoC | DNA-directed RNA polymerase subunit beta |
| 2022 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00386 | open | 3585 [NA] | 1194 [AA] | 378187-381771 | rpoB | DNA-directed RNA polymerase subunit beta |
| 2023 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00387 | open | 597 [NA] | 198 [AA] | 382000-382596 | hypothetical protein | |
| 2024 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00388 | open | 2484 [NA] | 827 [AA] | 382729-385212 | clpC_1 | ATP-dependent Clp protease ATP-binding subunit ClpC |
| 2025 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00389 | open | 468 [NA] | 155 [AA] | 385228-385695 | ctsR | Transcriptional regulator CtsR |
| 2026 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00390 | open | 1023 [NA] | 340 [AA] | 385838-386860 | adhA_1 | Alcohol dehydrogenase 1 |
| 2027 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00391 | open | 1203 [NA] | 400 [AA] | 387108-388310 | putative transporter | |
| 2028 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00392 | open | 864 [NA] | 287 [AA] | 388385-389248 | hdfR_1 | HTH-type transcriptional regulator HdfR |
| 2029 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00393 | open | 699 [NA] | 232 [AA] | 389262-389960 | hypothetical protein | |
| 2030 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00394 | open | 2499 [NA] | 832 [AA] | 390190-392688 | hypothetical protein | |
| 2031 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00395 | open | 1149 [NA] | 382 [AA] | 392719-393867 | hypothetical protein | |
| 2032 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00396 | open | 1020 [NA] | 339 [AA] | 394150-395169 | hypothetical protein | |
| 2033 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00402 | open | 642 [NA] | 213 [AA] | 396138-396779 | Deoxyguanosine kinase | |
| 2034 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00403 | open | 1473 [NA] | 490 [AA] | 396882-398354 | lysP_2 | Lysine-specific permease |
| 2035 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00405 | open | 471 [NA] | 156 [AA] | 398644-399114 | hypothetical protein | |
| 2036 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00406 | open | 675 [NA] | 224 [AA] | 399167-399841 | hypothetical protein | |
| 2037 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00407 | open | 201 [NA] | 66 [AA] | 399970-400170 | cspLA | Cold shock-like protein CspLA |
| 2038 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00408 | open | 648 [NA] | 215 [AA] | 400315-400962 | ideR | Iron-dependent repressor IdeR |
| 2039 | SEQF1856.2_AFTL01000019.1 | SEQF1856.2_00409 | open | 921 [NA] | 306 [AA] | 401149-402069 | czcD | Cadmium%2C cobalt and zincH(+)-K(+) antiporter |
| 2040 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00001 | open | 1116 [NA] | 371 [AA] | 38-1153 | yhhT | Putative transport protein YhhT |
| 2041 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00002 | open | 738 [NA] | 245 [AA] | 1382-2119 | hypothetical protein | |
| 2042 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00003 | open | 717 [NA] | 238 [AA] | 2489-3205 | hypothetical protein | |
| 2043 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00004 | open | 597 [NA] | 198 [AA] | 3345-3941 | hypothetical protein | |
| 2044 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00005 | open | 2217 [NA] | 738 [AA] | 4000-6216 | clpE | ATP-dependent Clp protease ATP-binding subunit ClpE |
| 2045 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00006 | open | 186 [NA] | 61 [AA] | 6482-6667 | hypothetical protein | |
| 2046 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00007 | open | 267 [NA] | 88 [AA] | 6786-7052 | ptsH | Phosphocarrier protein HPr |
| 2047 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00008 | open | 1731 [NA] | 576 [AA] | 7052-8782 | ptsI_1 | Phosphoenolpyruvate-protein phosphotransferase |
| 2048 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00009 | open | 1218 [NA] | 405 [AA] | 9024-10241 | Alpha-monoglucosyldiacylglycerol synthase | |
| 2049 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00010 | open | 1032 [NA] | 343 [AA] | 10244-11275 | cpoA | Alpha-galactosylglucosyldiacylglycerol synthase |
| 2050 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00011 | open | 1020 [NA] | 339 [AA] | 11268-12287 | hypothetical protein | |
| 2051 | SEQF1856.2_AFTL01000020.1 | SEQF1856.2_00012 | open | 249 [NA] | 82 [AA] | 12336-12584 | hypothetical protein |