Species: Streptococcus salivarius
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BMU - Buccal Mucosa
AKE - Keratinized Gingiva
HPA - Hard Palate
TDO - Tongue Dorsum
PTO - Palatine Tonsils
THR - Throat
SAL - Saliva
SUPP - Supra-gingival Plaque
SUBP - Sub-gingival Plaque
ANA - Nasal
STO - Stool
Prev - Prevalence
10th p - 10th percentile
90th p - 90th percentile
SUBP SUPP AKE BMU HPA SAL THR PTO TDO STO 0 1 2 3 4 5 6 7 8 9
Notes:
reads equally close to S. salivarius and S. vestibularis were assigned to S.salivarius, except for oligotypes V1V3_291 and V1V3_333 which were assigned to S. vestibularis
percent abundance
SUBP SUPP AKE BMU HPA SAL THR PTO TDO ANA STO Avg 0.142 0.089 4.164 2.753 6.962 2.943 7.953 7.864 8.944 0.017 10th p 0.000 0.000 0.000 0.100 0.531 0.269 0.631 0.661 0.987 0.000 90th p 0.200 0.176 12.098 6.186 18.603 7.568 19.212 15.792 20.218 0.052 Stdev 0.607 0.207 11.092 5.269 8.264 3.174 8.235 8.315 8.324 0.042 Prev 54.545 58.442 76.623 94.805 100.000 94.805 98.701 98.701 98.701 24.675
SUBP SUPP AKE BMU HPA SAL THR PTO TDO STO 0 1 2 3 4 5 6 7 8 9
Notes:
Reads equally close to S. salivarius, S. thermophilus, and S. vestibularis were assigned to S. salivarius.
Reads equally close to S. salivarius, S. thermophilus, S. vestibularis, and S. anginosus were assigned half to S. salivarius and half to S. anginosus.
percent abundance
SUBP SUPP AKE BMU HPA SAL THR PTO TDO ANA STO Avg 0.117 0.069 2.494 2.493 6.986 2.937 6.725 6.045 8.527 0.013 10th p 0.000 0.000 0.000 0.069 0.517 0.239 0.447 0.345 0.550 0.000 90th p 0.202 0.188 5.613 6.316 18.004 7.123 16.566 12.896 21.850 0.040 Stdev 0.507 0.140 7.990 4.513 8.430 3.622 6.849 7.459 8.792 0.030 Prev 43.919 50.000 74.324 95.270 98.649 98.649 98.649 97.973 98.649 26.573
From: Dewhirst 35x9 data (not published yet)
SUBP SUPP AKE BMU HPA SAL THR PTO TDO ANA 0 1 2 3 4 5 6 7 8 9 10 11 12
Notes:
Reads equally close to S. salivarius and S. vestibularis were assigned to S. salivarius.
Reads equally close to S. thermophilus and S. salivarius were assigned to S. salivarius.
percent abundance
SUBP SUPP AKE BMU HPA SAL THR PTO TDO ANA ANA Avg 0.534 0.753 5.168 4.966 10.861 8.877 11.229 9.229 7.976 0.019 10th p 0.011 0.009 0.028 0.237 1.000 0.110 0.929 0.732 0.126 0.000 90th p 1.264 0.870 15.235 11.465 25.906 24.976 24.783 21.633 21.726 0.042 Stdev 1.380 2.667 10.869 6.590 10.119 11.032 9.608 8.521 9.013 0.053 Prev 95.946 100.000 100.000 100.000 100.000 100.000 100.000 100.000 100.000 20.000